Gene : Lsat_1_v5_gn_5_120641 L. sativa V8
Defline:  (1 of 12) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3165
Name:  ? Lsat_1_v5_gn_5_120641 Secondary Identifier:  ? PAC:38963322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_120641 0.5kb upstream 0.5kb upstream 998   true Lsat_1_v8_lg_5: 242990805-242991802 Lactuca sativa
Lsat_1_v5_gn_5_120641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 242990805-242991304 Lactuca sativa
Lsat_1_v5_gn_5_120641 0.5kb downstream 0.5kb downstream 998   true Lsat_1_v8_lg_5: 242991305-242992302 Lactuca sativa
Lsat_1_v5_gn_5_120641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 242991803-242992302 Lactuca sativa
Lsat_1_v5_gn_5_120641 1.0kb upstream 1.0kb upstream 1498   true Lsat_1_v8_lg_5: 242990305-242991802 Lactuca sativa
Lsat_1_v5_gn_5_120641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 242990305-242991304 Lactuca sativa
Lsat_1_v5_gn_5_120641 1.0kb downstream 1.0kb downstream 1498   true Lsat_1_v8_lg_5: 242991305-242992802 Lactuca sativa
Lsat_1_v5_gn_5_120641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 242991803-242992802 Lactuca sativa
Lsat_1_v5_gn_5_120641 2.0kb upstream 2.0kb upstream 2498   true Lsat_1_v8_lg_5: 242989305-242991802 Lactuca sativa
Lsat_1_v5_gn_5_120641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 242989305-242991304 Lactuca sativa
Lsat_1_v5_gn_5_120641 2.0kb downstream 2.0kb downstream 2498   true Lsat_1_v8_lg_5: 242991305-242993802 Lactuca sativa
Lsat_1_v5_gn_5_120641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 242991803-242993802 Lactuca sativa
Lsat_1_v5_gn_5_120641 5.0kb upstream 5.0kb upstream 5498   true Lsat_1_v8_lg_5: 242986305-242991802 Lactuca sativa
Lsat_1_v5_gn_5_120641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 242986305-242991304 Lactuca sativa
Lsat_1_v5_gn_5_120641 5.0kb downstream 5.0kb downstream 5498   true Lsat_1_v8_lg_5: 242991305-242996802 Lactuca sativa
Lsat_1_v5_gn_5_120641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 242991803-242996802 Lactuca sativa
Lsat_1_v5_gn_5_120641 10.0kb upstream 10.0kb upstream 10498   true Lsat_1_v8_lg_5: 242981305-242991802 Lactuca sativa
Lsat_1_v5_gn_5_120641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 242981305-242991304 Lactuca sativa
Lsat_1_v5_gn_5_120641 10.0kb downstream 10.0kb downstream 10498   true Lsat_1_v8_lg_5: 242991305-243001802 Lactuca sativa
Lsat_1_v5_gn_5_120641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 242991803-243001802 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480436 5263 Asterids View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain