Gene : Lsat_1_v5_gn_5_12541 L. sativa V8
Defline:  (1 of 3) PTHR15601//PTHR15601:SF4 - STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 // SUBFAMILY NOT NAMED Genomic Order:  340
Name:  ? Lsat_1_v5_gn_5_12541 Secondary Identifier:  ? PAC:38968965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_12541 0.5kb upstream 0.5kb upstream 1284   true Lsat_1_v8_lg_5: 25134015-25135298 Lactuca sativa
Lsat_1_v5_gn_5_12541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 25134015-25134514 Lactuca sativa
Lsat_1_v5_gn_5_12541 0.5kb downstream 0.5kb downstream 1284   true Lsat_1_v8_lg_5: 25134515-25135798 Lactuca sativa
Lsat_1_v5_gn_5_12541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 25135299-25135798 Lactuca sativa
Lsat_1_v5_gn_5_12541 1.0kb upstream 1.0kb upstream 1784   true Lsat_1_v8_lg_5: 25133515-25135298 Lactuca sativa
Lsat_1_v5_gn_5_12541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 25133515-25134514 Lactuca sativa
Lsat_1_v5_gn_5_12541 1.0kb downstream 1.0kb downstream 1784   true Lsat_1_v8_lg_5: 25134515-25136298 Lactuca sativa
Lsat_1_v5_gn_5_12541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 25135299-25136298 Lactuca sativa
Lsat_1_v5_gn_5_12541 2.0kb upstream 2.0kb upstream 2784   true Lsat_1_v8_lg_5: 25132515-25135298 Lactuca sativa
Lsat_1_v5_gn_5_12541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 25132515-25134514 Lactuca sativa
Lsat_1_v5_gn_5_12541 2.0kb downstream 2.0kb downstream 2784   true Lsat_1_v8_lg_5: 25134515-25137298 Lactuca sativa
Lsat_1_v5_gn_5_12541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 25135299-25137298 Lactuca sativa
Lsat_1_v5_gn_5_12541 5.0kb upstream 5.0kb upstream 5784   true Lsat_1_v8_lg_5: 25129515-25135298 Lactuca sativa
Lsat_1_v5_gn_5_12541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 25129515-25134514 Lactuca sativa
Lsat_1_v5_gn_5_12541 5.0kb downstream 5.0kb downstream 5784   true Lsat_1_v8_lg_5: 25134515-25140298 Lactuca sativa
Lsat_1_v5_gn_5_12541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 25135299-25140298 Lactuca sativa
Lsat_1_v5_gn_5_12541 10.0kb upstream 10.0kb upstream 10784   true Lsat_1_v8_lg_5: 25124515-25135298 Lactuca sativa
Lsat_1_v5_gn_5_12541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 25124515-25134514 Lactuca sativa
Lsat_1_v5_gn_5_12541 10.0kb downstream 10.0kb downstream 10784   true Lsat_1_v8_lg_5: 25134515-25145298 Lactuca sativa
Lsat_1_v5_gn_5_12541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 25135299-25145298 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478345 5263 Asterids View MSA
123745695 5271 Pentapetalae View MSA
122795442 5272 Eudicot View MSA
122050162 5273 Angiosperm View MSA
121345372 5274 Embryophyte View MSA
123428764 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain