Gene : Lsat_1_v5_gn_5_12501 L. sativa V8
Defline:  (1 of 10) PF04669 - Polysaccharide biosynthesis (Polysacc_synt_4) Genomic Order:  342
Name:  ? Lsat_1_v5_gn_5_12501 Secondary Identifier:  ? PAC:38967316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_12501 0.5kb upstream 0.5kb upstream 2201   true Lsat_1_v8_lg_5: 25141016-25143216 Lactuca sativa
Lsat_1_v5_gn_5_12501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 25141016-25141515 Lactuca sativa
Lsat_1_v5_gn_5_12501 0.5kb downstream 0.5kb downstream 2201   true Lsat_1_v8_lg_5: 25141516-25143716 Lactuca sativa
Lsat_1_v5_gn_5_12501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 25143217-25143716 Lactuca sativa
Lsat_1_v5_gn_5_12501 1.0kb upstream 1.0kb upstream 2701   true Lsat_1_v8_lg_5: 25140516-25143216 Lactuca sativa
Lsat_1_v5_gn_5_12501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 25140516-25141515 Lactuca sativa
Lsat_1_v5_gn_5_12501 1.0kb downstream 1.0kb downstream 2701   true Lsat_1_v8_lg_5: 25141516-25144216 Lactuca sativa
Lsat_1_v5_gn_5_12501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 25143217-25144216 Lactuca sativa
Lsat_1_v5_gn_5_12501 2.0kb upstream 2.0kb upstream 3701   true Lsat_1_v8_lg_5: 25139516-25143216 Lactuca sativa
Lsat_1_v5_gn_5_12501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 25139516-25141515 Lactuca sativa
Lsat_1_v5_gn_5_12501 2.0kb downstream 2.0kb downstream 3701   true Lsat_1_v8_lg_5: 25141516-25145216 Lactuca sativa
Lsat_1_v5_gn_5_12501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 25143217-25145216 Lactuca sativa
Lsat_1_v5_gn_5_12501 5.0kb upstream 5.0kb upstream 6701   true Lsat_1_v8_lg_5: 25136516-25143216 Lactuca sativa
Lsat_1_v5_gn_5_12501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 25136516-25141515 Lactuca sativa
Lsat_1_v5_gn_5_12501 5.0kb downstream 5.0kb downstream 6701   true Lsat_1_v8_lg_5: 25141516-25148216 Lactuca sativa
Lsat_1_v5_gn_5_12501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 25143217-25148216 Lactuca sativa
Lsat_1_v5_gn_5_12501 10.0kb upstream 10.0kb upstream 11701   true Lsat_1_v8_lg_5: 25131516-25143216 Lactuca sativa
Lsat_1_v5_gn_5_12501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 25131516-25141515 Lactuca sativa
Lsat_1_v5_gn_5_12501 10.0kb downstream 10.0kb downstream 11701   true Lsat_1_v8_lg_5: 25141516-25153216 Lactuca sativa
Lsat_1_v5_gn_5_12501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 25143217-25153216 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479060 5263 Asterids View MSA
123748972 5271 Pentapetalae View MSA
122787958 5272 Eudicot View MSA
122051372 5273 Angiosperm View MSA
121312451 5274 Embryophyte View MSA
123349624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain