Gene : Lsat_1_v5_gn_5_126281 L. sativa V8
Defline:  (1 of 1) 2.5.1.90 - All-trans-octaprenyl-diphosphate synthase / Trans-prenyltransferase Genomic Order:  3345
Name:  ? Lsat_1_v5_gn_5_126281 Secondary Identifier:  ? PAC:38971785
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa HEXPPSYN-PWY Lactuca sativa pathologic  
Lsativa PWY-5120 Lactuca sativa pathologic  
Lsativa PWY-5783 Lactuca sativa pathologic  
Lsativa PWY-5805 Lactuca sativa pathologic  
Lsativa PWY-5807 Lactuca sativa pathologic  
Lsativa PWY-5864 Lactuca sativa pathologic  
Lsativa PWY-5910 Lactuca sativa pathologic  
Lsativa PWY-6520 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_126281 0.5kb upstream 0.5kb upstream 8815   true Lsat_1_v8_lg_5: 251209511-251218325 Lactuca sativa
Lsat_1_v5_gn_5_126281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 251217826-251218325 Lactuca sativa
Lsat_1_v5_gn_5_126281 0.5kb downstream 0.5kb downstream 8815   true Lsat_1_v8_lg_5: 251209011-251217825 Lactuca sativa
Lsat_1_v5_gn_5_126281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 251209011-251209510 Lactuca sativa
Lsat_1_v5_gn_5_126281 1.0kb upstream 1.0kb upstream 9315   true Lsat_1_v8_lg_5: 251209511-251218825 Lactuca sativa
Lsat_1_v5_gn_5_126281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 251217826-251218825 Lactuca sativa
Lsat_1_v5_gn_5_126281 1.0kb downstream 1.0kb downstream 9315   true Lsat_1_v8_lg_5: 251208511-251217825 Lactuca sativa
Lsat_1_v5_gn_5_126281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 251208511-251209510 Lactuca sativa
Lsat_1_v5_gn_5_126281 2.0kb upstream 2.0kb upstream 10315   true Lsat_1_v8_lg_5: 251209511-251219825 Lactuca sativa
Lsat_1_v5_gn_5_126281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 251217826-251219825 Lactuca sativa
Lsat_1_v5_gn_5_126281 2.0kb downstream 2.0kb downstream 10315   true Lsat_1_v8_lg_5: 251207511-251217825 Lactuca sativa
Lsat_1_v5_gn_5_126281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 251207511-251209510 Lactuca sativa
Lsat_1_v5_gn_5_126281 5.0kb upstream 5.0kb upstream 13315   true Lsat_1_v8_lg_5: 251209511-251222825 Lactuca sativa
Lsat_1_v5_gn_5_126281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 251217826-251222825 Lactuca sativa
Lsat_1_v5_gn_5_126281 5.0kb downstream 5.0kb downstream 13315   true Lsat_1_v8_lg_5: 251204511-251217825 Lactuca sativa
Lsat_1_v5_gn_5_126281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 251204511-251209510 Lactuca sativa
Lsat_1_v5_gn_5_126281 10.0kb upstream 10.0kb upstream 18315   true Lsat_1_v8_lg_5: 251209511-251227825 Lactuca sativa
Lsat_1_v5_gn_5_126281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 251217826-251227825 Lactuca sativa
Lsat_1_v5_gn_5_126281 10.0kb downstream 10.0kb downstream 18315   true Lsat_1_v8_lg_5: 251199511-251217825 Lactuca sativa
Lsat_1_v5_gn_5_126281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 251199511-251209510 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
121473068 5263 Asterids View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain