Gene : Lsat_1_v5_gn_5_126580 L. sativa V8
Defline:  (1 of 1) PTHR16517//PTHR16517:SF35 - TUBBY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3356
Name:  ? Lsat_1_v5_gn_5_126580 Secondary Identifier:  ? PAC:38964675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_126580 0.5kb upstream 0.5kb upstream 2810   true Lsat_1_v8_lg_5: 251847814-251850623 Lactuca sativa
Lsat_1_v5_gn_5_126580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 251847814-251848313 Lactuca sativa
Lsat_1_v5_gn_5_126580 0.5kb downstream 0.5kb downstream 2810   true Lsat_1_v8_lg_5: 251848314-251851123 Lactuca sativa
Lsat_1_v5_gn_5_126580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 251850624-251851123 Lactuca sativa
Lsat_1_v5_gn_5_126580 1.0kb upstream 1.0kb upstream 3310   true Lsat_1_v8_lg_5: 251847314-251850623 Lactuca sativa
Lsat_1_v5_gn_5_126580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 251847314-251848313 Lactuca sativa
Lsat_1_v5_gn_5_126580 1.0kb downstream 1.0kb downstream 3310   true Lsat_1_v8_lg_5: 251848314-251851623 Lactuca sativa
Lsat_1_v5_gn_5_126580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 251850624-251851623 Lactuca sativa
Lsat_1_v5_gn_5_126580 2.0kb upstream 2.0kb upstream 4310   true Lsat_1_v8_lg_5: 251846314-251850623 Lactuca sativa
Lsat_1_v5_gn_5_126580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 251846314-251848313 Lactuca sativa
Lsat_1_v5_gn_5_126580 2.0kb downstream 2.0kb downstream 4310   true Lsat_1_v8_lg_5: 251848314-251852623 Lactuca sativa
Lsat_1_v5_gn_5_126580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 251850624-251852623 Lactuca sativa
Lsat_1_v5_gn_5_126580 5.0kb upstream 5.0kb upstream 7310   true Lsat_1_v8_lg_5: 251843314-251850623 Lactuca sativa
Lsat_1_v5_gn_5_126580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 251843314-251848313 Lactuca sativa
Lsat_1_v5_gn_5_126580 5.0kb downstream 5.0kb downstream 7310   true Lsat_1_v8_lg_5: 251848314-251855623 Lactuca sativa
Lsat_1_v5_gn_5_126580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 251850624-251855623 Lactuca sativa
Lsat_1_v5_gn_5_126580 10.0kb upstream 10.0kb upstream 12310   true Lsat_1_v8_lg_5: 251838314-251850623 Lactuca sativa
Lsat_1_v5_gn_5_126580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 251838314-251848313 Lactuca sativa
Lsat_1_v5_gn_5_126580 10.0kb downstream 10.0kb downstream 12310   true Lsat_1_v8_lg_5: 251848314-251860623 Lactuca sativa
Lsat_1_v5_gn_5_126580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 251850624-251860623 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479065 5263 Asterids View MSA
123740168 5271 Pentapetalae View MSA
122785762 5272 Eudicot View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain