Gene : Lsat_1_v5_gn_5_127561 L. sativa V8
Defline:  (1 of 2) PTHR24326:SF257 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-52 Genomic Order:  3408
Name:  ? Lsat_1_v5_gn_5_127561 Secondary Identifier:  ? PAC:38966535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_127561 0.5kb upstream 0.5kb upstream 1242   true Lsat_1_v8_lg_5: 253969054-253970295 Lactuca sativa
Lsat_1_v5_gn_5_127561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 253969796-253970295 Lactuca sativa
Lsat_1_v5_gn_5_127561 0.5kb downstream 0.5kb downstream 1242   true Lsat_1_v8_lg_5: 253968554-253969795 Lactuca sativa
Lsat_1_v5_gn_5_127561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 253968554-253969053 Lactuca sativa
Lsat_1_v5_gn_5_127561 1.0kb upstream 1.0kb upstream 1742   true Lsat_1_v8_lg_5: 253969054-253970795 Lactuca sativa
Lsat_1_v5_gn_5_127561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 253969796-253970795 Lactuca sativa
Lsat_1_v5_gn_5_127561 1.0kb downstream 1.0kb downstream 1742   true Lsat_1_v8_lg_5: 253968054-253969795 Lactuca sativa
Lsat_1_v5_gn_5_127561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 253968054-253969053 Lactuca sativa
Lsat_1_v5_gn_5_127561 2.0kb upstream 2.0kb upstream 2742   true Lsat_1_v8_lg_5: 253969054-253971795 Lactuca sativa
Lsat_1_v5_gn_5_127561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 253969796-253971795 Lactuca sativa
Lsat_1_v5_gn_5_127561 2.0kb downstream 2.0kb downstream 2742   true Lsat_1_v8_lg_5: 253967054-253969795 Lactuca sativa
Lsat_1_v5_gn_5_127561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 253967054-253969053 Lactuca sativa
Lsat_1_v5_gn_5_127561 5.0kb upstream 5.0kb upstream 5742   true Lsat_1_v8_lg_5: 253969054-253974795 Lactuca sativa
Lsat_1_v5_gn_5_127561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 253969796-253974795 Lactuca sativa
Lsat_1_v5_gn_5_127561 5.0kb downstream 5.0kb downstream 5742   true Lsat_1_v8_lg_5: 253964054-253969795 Lactuca sativa
Lsat_1_v5_gn_5_127561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 253964054-253969053 Lactuca sativa
Lsat_1_v5_gn_5_127561 10.0kb upstream 10.0kb upstream 10742   true Lsat_1_v8_lg_5: 253969054-253979795 Lactuca sativa
Lsat_1_v5_gn_5_127561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 253969796-253979795 Lactuca sativa
Lsat_1_v5_gn_5_127561 10.0kb downstream 10.0kb downstream 10742   true Lsat_1_v8_lg_5: 253959054-253969795 Lactuca sativa
Lsat_1_v5_gn_5_127561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 253959054-253969053 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791747 5273 Angiosperm View MSA
121477451 5263 Asterids View MSA
123743183 5271 Pentapetalae View MSA
122789051 5272 Eudicot View MSA
121063046 5274 Embryophyte View MSA
123102832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain