Gene : Lsat_1_v5_gn_5_127301 L. sativa V8
Defline:  (1 of 5) K00026 - malate dehydrogenase (MDH2) Genomic Order:  3371
Name:  ? Lsat_1_v5_gn_5_127301 Secondary Identifier:  ? PAC:38965531
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa GLYOXYLATE-BYPASS Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PWY-561 Lactuca sativa pathologic  
Lsativa PWY-5690 Lactuca sativa pathologic  
Lsativa PWY-7115 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_127301 0.5kb upstream 0.5kb upstream 2947   true Lsat_1_v8_lg_5: 252211060-252214006 Lactuca sativa
Lsat_1_v5_gn_5_127301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 252211060-252211559 Lactuca sativa
Lsat_1_v5_gn_5_127301 0.5kb downstream 0.5kb downstream 2947   true Lsat_1_v8_lg_5: 252211560-252214506 Lactuca sativa
Lsat_1_v5_gn_5_127301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 252214007-252214506 Lactuca sativa
Lsat_1_v5_gn_5_127301 1.0kb upstream 1.0kb upstream 3447   true Lsat_1_v8_lg_5: 252210560-252214006 Lactuca sativa
Lsat_1_v5_gn_5_127301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 252210560-252211559 Lactuca sativa
Lsat_1_v5_gn_5_127301 1.0kb downstream 1.0kb downstream 3447   true Lsat_1_v8_lg_5: 252211560-252215006 Lactuca sativa
Lsat_1_v5_gn_5_127301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 252214007-252215006 Lactuca sativa
Lsat_1_v5_gn_5_127301 2.0kb upstream 2.0kb upstream 4447   true Lsat_1_v8_lg_5: 252209560-252214006 Lactuca sativa
Lsat_1_v5_gn_5_127301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 252209560-252211559 Lactuca sativa
Lsat_1_v5_gn_5_127301 2.0kb downstream 2.0kb downstream 4447   true Lsat_1_v8_lg_5: 252211560-252216006 Lactuca sativa
Lsat_1_v5_gn_5_127301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 252214007-252216006 Lactuca sativa
Lsat_1_v5_gn_5_127301 5.0kb upstream 5.0kb upstream 7447   true Lsat_1_v8_lg_5: 252206560-252214006 Lactuca sativa
Lsat_1_v5_gn_5_127301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 252206560-252211559 Lactuca sativa
Lsat_1_v5_gn_5_127301 5.0kb downstream 5.0kb downstream 7447   true Lsat_1_v8_lg_5: 252211560-252219006 Lactuca sativa
Lsat_1_v5_gn_5_127301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 252214007-252219006 Lactuca sativa
Lsat_1_v5_gn_5_127301 10.0kb upstream 10.0kb upstream 12447   true Lsat_1_v8_lg_5: 252201560-252214006 Lactuca sativa
Lsat_1_v5_gn_5_127301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 252201560-252211559 Lactuca sativa
Lsat_1_v5_gn_5_127301 10.0kb downstream 10.0kb downstream 12447   true Lsat_1_v8_lg_5: 252211560-252224006 Lactuca sativa
Lsat_1_v5_gn_5_127301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 252214007-252224006 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480753 5263 Asterids View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain