Gene : Lsat_1_v5_gn_5_127461 L. sativa V8
Defline:  (1 of 2) PTHR33785//PTHR33785:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F4B12 Genomic Order:  3405
Name:  ? Lsat_1_v5_gn_5_127461 Secondary Identifier:  ? PAC:38968985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_127461 0.5kb upstream 0.5kb upstream 1700   true Lsat_1_v8_lg_5: 253795058-253796757 Lactuca sativa
Lsat_1_v5_gn_5_127461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 253796258-253796757 Lactuca sativa
Lsat_1_v5_gn_5_127461 0.5kb downstream 0.5kb downstream 1700   true Lsat_1_v8_lg_5: 253794558-253796257 Lactuca sativa
Lsat_1_v5_gn_5_127461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 253794558-253795057 Lactuca sativa
Lsat_1_v5_gn_5_127461 1.0kb upstream 1.0kb upstream 2200   true Lsat_1_v8_lg_5: 253795058-253797257 Lactuca sativa
Lsat_1_v5_gn_5_127461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 253796258-253797257 Lactuca sativa
Lsat_1_v5_gn_5_127461 1.0kb downstream 1.0kb downstream 2200   true Lsat_1_v8_lg_5: 253794058-253796257 Lactuca sativa
Lsat_1_v5_gn_5_127461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 253794058-253795057 Lactuca sativa
Lsat_1_v5_gn_5_127461 2.0kb upstream 2.0kb upstream 3200   true Lsat_1_v8_lg_5: 253795058-253798257 Lactuca sativa
Lsat_1_v5_gn_5_127461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 253796258-253798257 Lactuca sativa
Lsat_1_v5_gn_5_127461 2.0kb downstream 2.0kb downstream 3200   true Lsat_1_v8_lg_5: 253793058-253796257 Lactuca sativa
Lsat_1_v5_gn_5_127461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 253793058-253795057 Lactuca sativa
Lsat_1_v5_gn_5_127461 5.0kb upstream 5.0kb upstream 6200   true Lsat_1_v8_lg_5: 253795058-253801257 Lactuca sativa
Lsat_1_v5_gn_5_127461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 253796258-253801257 Lactuca sativa
Lsat_1_v5_gn_5_127461 5.0kb downstream 5.0kb downstream 6200   true Lsat_1_v8_lg_5: 253790058-253796257 Lactuca sativa
Lsat_1_v5_gn_5_127461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 253790058-253795057 Lactuca sativa
Lsat_1_v5_gn_5_127461 10.0kb upstream 10.0kb upstream 11200   true Lsat_1_v8_lg_5: 253795058-253806257 Lactuca sativa
Lsat_1_v5_gn_5_127461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 253796258-253806257 Lactuca sativa
Lsat_1_v5_gn_5_127461 10.0kb downstream 10.0kb downstream 11200   true Lsat_1_v8_lg_5: 253785058-253796257 Lactuca sativa
Lsat_1_v5_gn_5_127461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 253785058-253795057 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475549 5263 Asterids View MSA
123750914 5271 Pentapetalae View MSA
122795249 5272 Eudicot View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain