Gene : Lsat_1_v5_gn_5_128220 L. sativa V8
Defline:  (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) Genomic Order:  3415
Name:  ? Lsat_1_v5_gn_5_128220 Secondary Identifier:  ? PAC:38970079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_128220 0.5kb upstream 0.5kb upstream 1634   true Lsat_1_v8_lg_5: 254495076-254496709 Lactuca sativa
Lsat_1_v5_gn_5_128220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 254495076-254495575 Lactuca sativa
Lsat_1_v5_gn_5_128220 0.5kb downstream 0.5kb downstream 1634   true Lsat_1_v8_lg_5: 254495576-254497209 Lactuca sativa
Lsat_1_v5_gn_5_128220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 254496710-254497209 Lactuca sativa
Lsat_1_v5_gn_5_128220 1.0kb upstream 1.0kb upstream 2134   true Lsat_1_v8_lg_5: 254494576-254496709 Lactuca sativa
Lsat_1_v5_gn_5_128220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 254494576-254495575 Lactuca sativa
Lsat_1_v5_gn_5_128220 1.0kb downstream 1.0kb downstream 2134   true Lsat_1_v8_lg_5: 254495576-254497709 Lactuca sativa
Lsat_1_v5_gn_5_128220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 254496710-254497709 Lactuca sativa
Lsat_1_v5_gn_5_128220 2.0kb upstream 2.0kb upstream 3134   true Lsat_1_v8_lg_5: 254493576-254496709 Lactuca sativa
Lsat_1_v5_gn_5_128220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 254493576-254495575 Lactuca sativa
Lsat_1_v5_gn_5_128220 2.0kb downstream 2.0kb downstream 3134   true Lsat_1_v8_lg_5: 254495576-254498709 Lactuca sativa
Lsat_1_v5_gn_5_128220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 254496710-254498709 Lactuca sativa
Lsat_1_v5_gn_5_128220 5.0kb upstream 5.0kb upstream 6134   true Lsat_1_v8_lg_5: 254490576-254496709 Lactuca sativa
Lsat_1_v5_gn_5_128220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 254490576-254495575 Lactuca sativa
Lsat_1_v5_gn_5_128220 5.0kb downstream 5.0kb downstream 6134   true Lsat_1_v8_lg_5: 254495576-254501709 Lactuca sativa
Lsat_1_v5_gn_5_128220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 254496710-254501709 Lactuca sativa
Lsat_1_v5_gn_5_128220 10.0kb upstream 10.0kb upstream 11134   true Lsat_1_v8_lg_5: 254485576-254496709 Lactuca sativa
Lsat_1_v5_gn_5_128220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 254485576-254495575 Lactuca sativa
Lsat_1_v5_gn_5_128220 10.0kb downstream 10.0kb downstream 11134   true Lsat_1_v8_lg_5: 254495576-254506709 Lactuca sativa
Lsat_1_v5_gn_5_128220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 254496710-254506709 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027102 5273 Angiosperm View MSA
121471323 5263 Asterids View MSA
123738976 5271 Pentapetalae View MSA
122785943 5272 Eudicot View MSA
121345926 5274 Embryophyte View MSA
123425445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain