Gene : Lsat_1_v5_gn_5_130241 L. sativa V8
Defline:  (1 of 1) PTHR31852//PTHR31852:SF17 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  3528
Name:  ? Lsat_1_v5_gn_5_130241 Secondary Identifier:  ? PAC:38967252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_130241 0.5kb upstream 0.5kb upstream 2763   true Lsat_1_v8_lg_5: 260159116-260161878 Lactuca sativa
Lsat_1_v5_gn_5_130241 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 260161379-260161878 Lactuca sativa
Lsat_1_v5_gn_5_130241 0.5kb downstream 0.5kb downstream 2763   true Lsat_1_v8_lg_5: 260158616-260161378 Lactuca sativa
Lsat_1_v5_gn_5_130241 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 260158616-260159115 Lactuca sativa
Lsat_1_v5_gn_5_130241 1.0kb upstream 1.0kb upstream 3263   true Lsat_1_v8_lg_5: 260159116-260162378 Lactuca sativa
Lsat_1_v5_gn_5_130241 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 260161379-260162378 Lactuca sativa
Lsat_1_v5_gn_5_130241 1.0kb downstream 1.0kb downstream 3263   true Lsat_1_v8_lg_5: 260158116-260161378 Lactuca sativa
Lsat_1_v5_gn_5_130241 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 260158116-260159115 Lactuca sativa
Lsat_1_v5_gn_5_130241 2.0kb upstream 2.0kb upstream 4263   true Lsat_1_v8_lg_5: 260159116-260163378 Lactuca sativa
Lsat_1_v5_gn_5_130241 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 260161379-260163378 Lactuca sativa
Lsat_1_v5_gn_5_130241 2.0kb downstream 2.0kb downstream 4263   true Lsat_1_v8_lg_5: 260157116-260161378 Lactuca sativa
Lsat_1_v5_gn_5_130241 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 260157116-260159115 Lactuca sativa
Lsat_1_v5_gn_5_130241 5.0kb upstream 5.0kb upstream 7263   true Lsat_1_v8_lg_5: 260159116-260166378 Lactuca sativa
Lsat_1_v5_gn_5_130241 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 260161379-260166378 Lactuca sativa
Lsat_1_v5_gn_5_130241 5.0kb downstream 5.0kb downstream 7263   true Lsat_1_v8_lg_5: 260154116-260161378 Lactuca sativa
Lsat_1_v5_gn_5_130241 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 260154116-260159115 Lactuca sativa
Lsat_1_v5_gn_5_130241 10.0kb upstream 10.0kb upstream 12263   true Lsat_1_v8_lg_5: 260159116-260171378 Lactuca sativa
Lsat_1_v5_gn_5_130241 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 260161379-260171378 Lactuca sativa
Lsat_1_v5_gn_5_130241 10.0kb downstream 10.0kb downstream 12263   true Lsat_1_v8_lg_5: 260149116-260161378 Lactuca sativa
Lsat_1_v5_gn_5_130241 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 260149116-260159115 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469671 5263 Asterids View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain