Gene : Lsat_1_v5_gn_5_13221 L. sativa V8
Defline:  (1 of 1) K02495 - oxygen-independent coproporphyrinogen III oxidase (hemN, hemZ) Genomic Order:  364
Name:  ? Lsat_1_v5_gn_5_13221 Secondary Identifier:  ? PAC:38966387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_13221 0.5kb upstream 0.5kb upstream 2202   true Lsat_1_v8_lg_5: 26110406-26112607 Lactuca sativa
Lsat_1_v5_gn_5_13221 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 26110406-26110905 Lactuca sativa
Lsat_1_v5_gn_5_13221 0.5kb downstream 0.5kb downstream 2202   true Lsat_1_v8_lg_5: 26110906-26113107 Lactuca sativa
Lsat_1_v5_gn_5_13221 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 26112608-26113107 Lactuca sativa
Lsat_1_v5_gn_5_13221 1.0kb upstream 1.0kb upstream 2702   true Lsat_1_v8_lg_5: 26109906-26112607 Lactuca sativa
Lsat_1_v5_gn_5_13221 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 26109906-26110905 Lactuca sativa
Lsat_1_v5_gn_5_13221 1.0kb downstream 1.0kb downstream 2702   true Lsat_1_v8_lg_5: 26110906-26113607 Lactuca sativa
Lsat_1_v5_gn_5_13221 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 26112608-26113607 Lactuca sativa
Lsat_1_v5_gn_5_13221 2.0kb upstream 2.0kb upstream 3702   true Lsat_1_v8_lg_5: 26108906-26112607 Lactuca sativa
Lsat_1_v5_gn_5_13221 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 26108906-26110905 Lactuca sativa
Lsat_1_v5_gn_5_13221 2.0kb downstream 2.0kb downstream 3702   true Lsat_1_v8_lg_5: 26110906-26114607 Lactuca sativa
Lsat_1_v5_gn_5_13221 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 26112608-26114607 Lactuca sativa
Lsat_1_v5_gn_5_13221 5.0kb upstream 5.0kb upstream 6702   true Lsat_1_v8_lg_5: 26105906-26112607 Lactuca sativa
Lsat_1_v5_gn_5_13221 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 26105906-26110905 Lactuca sativa
Lsat_1_v5_gn_5_13221 5.0kb downstream 5.0kb downstream 6702   true Lsat_1_v8_lg_5: 26110906-26117607 Lactuca sativa
Lsat_1_v5_gn_5_13221 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 26112608-26117607 Lactuca sativa
Lsat_1_v5_gn_5_13221 10.0kb upstream 10.0kb upstream 11702   true Lsat_1_v8_lg_5: 26100906-26112607 Lactuca sativa
Lsat_1_v5_gn_5_13221 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 26100906-26110905 Lactuca sativa
Lsat_1_v5_gn_5_13221 10.0kb downstream 10.0kb downstream 11702   true Lsat_1_v8_lg_5: 26110906-26122607 Lactuca sativa
Lsat_1_v5_gn_5_13221 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 26112608-26122607 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473695 5263 Asterids View MSA
123740173 5271 Pentapetalae View MSA
122786223 5272 Eudicot View MSA
122048362 5273 Angiosperm View MSA
121344861 5274 Embryophyte View MSA
123424755 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain