Gene : Lsat_1_v5_gn_5_172941 L. sativa V8
Defline:  (1 of 6) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) Genomic Order:  4737
Name:  ? Lsat_1_v5_gn_5_172941 Secondary Identifier:  ? PAC:38970101
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7279 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_172941 0.5kb upstream 0.5kb upstream 3751   true Lsat_1_v8_lg_5: 315328492-315332242 Lactuca sativa
Lsat_1_v5_gn_5_172941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 315331743-315332242 Lactuca sativa
Lsat_1_v5_gn_5_172941 0.5kb downstream 0.5kb downstream 3751   true Lsat_1_v8_lg_5: 315327992-315331742 Lactuca sativa
Lsat_1_v5_gn_5_172941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 315327992-315328491 Lactuca sativa
Lsat_1_v5_gn_5_172941 1.0kb upstream 1.0kb upstream 4251   true Lsat_1_v8_lg_5: 315328492-315332742 Lactuca sativa
Lsat_1_v5_gn_5_172941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 315331743-315332742 Lactuca sativa
Lsat_1_v5_gn_5_172941 1.0kb downstream 1.0kb downstream 4251   true Lsat_1_v8_lg_5: 315327492-315331742 Lactuca sativa
Lsat_1_v5_gn_5_172941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 315327492-315328491 Lactuca sativa
Lsat_1_v5_gn_5_172941 2.0kb upstream 2.0kb upstream 5251   true Lsat_1_v8_lg_5: 315328492-315333742 Lactuca sativa
Lsat_1_v5_gn_5_172941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 315331743-315333742 Lactuca sativa
Lsat_1_v5_gn_5_172941 2.0kb downstream 2.0kb downstream 5251   true Lsat_1_v8_lg_5: 315326492-315331742 Lactuca sativa
Lsat_1_v5_gn_5_172941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 315326492-315328491 Lactuca sativa
Lsat_1_v5_gn_5_172941 5.0kb upstream 5.0kb upstream 8251   true Lsat_1_v8_lg_5: 315328492-315336742 Lactuca sativa
Lsat_1_v5_gn_5_172941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 315331743-315336742 Lactuca sativa
Lsat_1_v5_gn_5_172941 5.0kb downstream 5.0kb downstream 8251   true Lsat_1_v8_lg_5: 315323492-315331742 Lactuca sativa
Lsat_1_v5_gn_5_172941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 315323492-315328491 Lactuca sativa
Lsat_1_v5_gn_5_172941 10.0kb upstream 10.0kb upstream 13251   true Lsat_1_v8_lg_5: 315328492-315341742 Lactuca sativa
Lsat_1_v5_gn_5_172941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 315331743-315341742 Lactuca sativa
Lsat_1_v5_gn_5_172941 10.0kb downstream 10.0kb downstream 13251   true Lsat_1_v8_lg_5: 315318492-315331742 Lactuca sativa
Lsat_1_v5_gn_5_172941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 315318492-315328491 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467698 5263 Asterids View MSA
123742437 5271 Pentapetalae View MSA
122794116 5272 Eudicot View MSA
122050116 5273 Angiosperm View MSA
121344067 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain