Gene : Lsat_1_v5_gn_5_176000 L. sativa V8
Defline:  (1 of 1) K13288 - oligoribonuclease (orn, REX2, REXO2) Genomic Order:  4851
Name:  ? Lsat_1_v5_gn_5_176000 Secondary Identifier:  ? PAC:38968245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_176000 0.5kb upstream 0.5kb upstream 3406   true Lsat_1_v8_lg_5: 320308729-320312134 Lactuca sativa
Lsat_1_v5_gn_5_176000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 320308729-320309228 Lactuca sativa
Lsat_1_v5_gn_5_176000 0.5kb downstream 0.5kb downstream 3406   true Lsat_1_v8_lg_5: 320309229-320312634 Lactuca sativa
Lsat_1_v5_gn_5_176000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 320312135-320312634 Lactuca sativa
Lsat_1_v5_gn_5_176000 1.0kb upstream 1.0kb upstream 3906   true Lsat_1_v8_lg_5: 320308229-320312134 Lactuca sativa
Lsat_1_v5_gn_5_176000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 320308229-320309228 Lactuca sativa
Lsat_1_v5_gn_5_176000 1.0kb downstream 1.0kb downstream 3906   true Lsat_1_v8_lg_5: 320309229-320313134 Lactuca sativa
Lsat_1_v5_gn_5_176000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 320312135-320313134 Lactuca sativa
Lsat_1_v5_gn_5_176000 2.0kb upstream 2.0kb upstream 4906   true Lsat_1_v8_lg_5: 320307229-320312134 Lactuca sativa
Lsat_1_v5_gn_5_176000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 320307229-320309228 Lactuca sativa
Lsat_1_v5_gn_5_176000 2.0kb downstream 2.0kb downstream 4906   true Lsat_1_v8_lg_5: 320309229-320314134 Lactuca sativa
Lsat_1_v5_gn_5_176000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 320312135-320314134 Lactuca sativa
Lsat_1_v5_gn_5_176000 5.0kb upstream 5.0kb upstream 7906   true Lsat_1_v8_lg_5: 320304229-320312134 Lactuca sativa
Lsat_1_v5_gn_5_176000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 320304229-320309228 Lactuca sativa
Lsat_1_v5_gn_5_176000 5.0kb downstream 5.0kb downstream 7906   true Lsat_1_v8_lg_5: 320309229-320317134 Lactuca sativa
Lsat_1_v5_gn_5_176000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 320312135-320317134 Lactuca sativa
Lsat_1_v5_gn_5_176000 10.0kb upstream 10.0kb upstream 12906   true Lsat_1_v8_lg_5: 320299229-320312134 Lactuca sativa
Lsat_1_v5_gn_5_176000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 320299229-320309228 Lactuca sativa
Lsat_1_v5_gn_5_176000 10.0kb downstream 10.0kb downstream 12906   true Lsat_1_v8_lg_5: 320309229-320322134 Lactuca sativa
Lsat_1_v5_gn_5_176000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 320312135-320322134 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475430 5263 Asterids View MSA
123741047 5271 Pentapetalae View MSA
122789604 5272 Eudicot View MSA
122046409 5273 Angiosperm View MSA
121344784 5274 Embryophyte View MSA
123423966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain