Gene : Lsat_1_v5_gn_5_176940 L. sativa V8
Defline:  (1 of 2) K05663 - mitochondrial ABC transporter ATM (ABC.ATM) Genomic Order:  4841
Name:  ? Lsat_1_v5_gn_5_176940 Secondary Identifier:  ? PAC:38971095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_176940 0.5kb upstream 0.5kb upstream 6548   true Lsat_1_v8_lg_5: 320168326-320174873 Lactuca sativa
Lsat_1_v5_gn_5_176940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 320174374-320174873 Lactuca sativa
Lsat_1_v5_gn_5_176940 0.5kb downstream 0.5kb downstream 6548   true Lsat_1_v8_lg_5: 320167826-320174373 Lactuca sativa
Lsat_1_v5_gn_5_176940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 320167826-320168325 Lactuca sativa
Lsat_1_v5_gn_5_176940 1.0kb upstream 1.0kb upstream 7048   true Lsat_1_v8_lg_5: 320168326-320175373 Lactuca sativa
Lsat_1_v5_gn_5_176940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 320174374-320175373 Lactuca sativa
Lsat_1_v5_gn_5_176940 1.0kb downstream 1.0kb downstream 7048   true Lsat_1_v8_lg_5: 320167326-320174373 Lactuca sativa
Lsat_1_v5_gn_5_176940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 320167326-320168325 Lactuca sativa
Lsat_1_v5_gn_5_176940 2.0kb upstream 2.0kb upstream 8048   true Lsat_1_v8_lg_5: 320168326-320176373 Lactuca sativa
Lsat_1_v5_gn_5_176940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 320174374-320176373 Lactuca sativa
Lsat_1_v5_gn_5_176940 2.0kb downstream 2.0kb downstream 8048   true Lsat_1_v8_lg_5: 320166326-320174373 Lactuca sativa
Lsat_1_v5_gn_5_176940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 320166326-320168325 Lactuca sativa
Lsat_1_v5_gn_5_176940 5.0kb upstream 5.0kb upstream 11048   true Lsat_1_v8_lg_5: 320168326-320179373 Lactuca sativa
Lsat_1_v5_gn_5_176940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 320174374-320179373 Lactuca sativa
Lsat_1_v5_gn_5_176940 5.0kb downstream 5.0kb downstream 11048   true Lsat_1_v8_lg_5: 320163326-320174373 Lactuca sativa
Lsat_1_v5_gn_5_176940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 320163326-320168325 Lactuca sativa
Lsat_1_v5_gn_5_176940 10.0kb upstream 10.0kb upstream 16048   true Lsat_1_v8_lg_5: 320168326-320184373 Lactuca sativa
Lsat_1_v5_gn_5_176940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 320174374-320184373 Lactuca sativa
Lsat_1_v5_gn_5_176940 10.0kb downstream 10.0kb downstream 16048   true Lsat_1_v8_lg_5: 320158326-320174373 Lactuca sativa
Lsat_1_v5_gn_5_176940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 320158326-320168325 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041097 5273 Angiosperm View MSA
121452860 5263 Asterids View MSA
123750539 5271 Pentapetalae View MSA
122787289 5272 Eudicot View MSA
121345218 5274 Embryophyte View MSA
123424438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain