Gene : Lsat_1_v5_gn_5_179560 L. sativa V8
Defline:  (1 of 1) PTHR27008//PTHR27008:SF28 - FAMILY NOT NAMED // KINASE-LIKE PROTEIN TMKL1-RELATED Genomic Order:  4962
Name:  ? Lsat_1_v5_gn_5_179560 Secondary Identifier:  ? PAC:38964716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_179560 0.5kb upstream 0.5kb upstream 3288   true Lsat_1_v8_lg_5: 325444186-325447473 Lactuca sativa
Lsat_1_v5_gn_5_179560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 325444186-325444685 Lactuca sativa
Lsat_1_v5_gn_5_179560 0.5kb downstream 0.5kb downstream 3288   true Lsat_1_v8_lg_5: 325444686-325447973 Lactuca sativa
Lsat_1_v5_gn_5_179560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 325447474-325447973 Lactuca sativa
Lsat_1_v5_gn_5_179560 1.0kb upstream 1.0kb upstream 3788   true Lsat_1_v8_lg_5: 325443686-325447473 Lactuca sativa
Lsat_1_v5_gn_5_179560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 325443686-325444685 Lactuca sativa
Lsat_1_v5_gn_5_179560 1.0kb downstream 1.0kb downstream 3788   true Lsat_1_v8_lg_5: 325444686-325448473 Lactuca sativa
Lsat_1_v5_gn_5_179560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 325447474-325448473 Lactuca sativa
Lsat_1_v5_gn_5_179560 2.0kb upstream 2.0kb upstream 4788   true Lsat_1_v8_lg_5: 325442686-325447473 Lactuca sativa
Lsat_1_v5_gn_5_179560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 325442686-325444685 Lactuca sativa
Lsat_1_v5_gn_5_179560 2.0kb downstream 2.0kb downstream 4788   true Lsat_1_v8_lg_5: 325444686-325449473 Lactuca sativa
Lsat_1_v5_gn_5_179560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 325447474-325449473 Lactuca sativa
Lsat_1_v5_gn_5_179560 5.0kb upstream 5.0kb upstream 7788   true Lsat_1_v8_lg_5: 325439686-325447473 Lactuca sativa
Lsat_1_v5_gn_5_179560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 325439686-325444685 Lactuca sativa
Lsat_1_v5_gn_5_179560 5.0kb downstream 5.0kb downstream 7788   true Lsat_1_v8_lg_5: 325444686-325452473 Lactuca sativa
Lsat_1_v5_gn_5_179560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 325447474-325452473 Lactuca sativa
Lsat_1_v5_gn_5_179560 10.0kb upstream 10.0kb upstream 12788   true Lsat_1_v8_lg_5: 325434686-325447473 Lactuca sativa
Lsat_1_v5_gn_5_179560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 325434686-325444685 Lactuca sativa
Lsat_1_v5_gn_5_179560 10.0kb downstream 10.0kb downstream 12788   true Lsat_1_v8_lg_5: 325444686-325457473 Lactuca sativa
Lsat_1_v5_gn_5_179560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 325447474-325457473 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475769 5263 Asterids View MSA
123737140 5271 Pentapetalae View MSA
122786867 5272 Eudicot View MSA
122044440 5273 Angiosperm View MSA
121348994 5274 Embryophyte View MSA
123381116 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain