Gene : Lsat_1_v5_gn_5_178681 L. sativa V8
Defline:  (1 of 2) PTHR11214//PTHR11214:SF125 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED Genomic Order:  4905
Name:  ? Lsat_1_v5_gn_5_178681 Secondary Identifier:  ? PAC:38963959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_178681 0.5kb upstream 0.5kb upstream 3947   true Lsat_1_v8_lg_5: 322160745-322164691 Lactuca sativa
Lsat_1_v5_gn_5_178681 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 322164192-322164691 Lactuca sativa
Lsat_1_v5_gn_5_178681 0.5kb downstream 0.5kb downstream 3947   true Lsat_1_v8_lg_5: 322160245-322164191 Lactuca sativa
Lsat_1_v5_gn_5_178681 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 322160245-322160744 Lactuca sativa
Lsat_1_v5_gn_5_178681 1.0kb upstream 1.0kb upstream 4447   true Lsat_1_v8_lg_5: 322160745-322165191 Lactuca sativa
Lsat_1_v5_gn_5_178681 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 322164192-322165191 Lactuca sativa
Lsat_1_v5_gn_5_178681 1.0kb downstream 1.0kb downstream 4447   true Lsat_1_v8_lg_5: 322159745-322164191 Lactuca sativa
Lsat_1_v5_gn_5_178681 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 322159745-322160744 Lactuca sativa
Lsat_1_v5_gn_5_178681 2.0kb upstream 2.0kb upstream 5447   true Lsat_1_v8_lg_5: 322160745-322166191 Lactuca sativa
Lsat_1_v5_gn_5_178681 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 322164192-322166191 Lactuca sativa
Lsat_1_v5_gn_5_178681 2.0kb downstream 2.0kb downstream 5447   true Lsat_1_v8_lg_5: 322158745-322164191 Lactuca sativa
Lsat_1_v5_gn_5_178681 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 322158745-322160744 Lactuca sativa
Lsat_1_v5_gn_5_178681 5.0kb upstream 5.0kb upstream 8447   true Lsat_1_v8_lg_5: 322160745-322169191 Lactuca sativa
Lsat_1_v5_gn_5_178681 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 322164192-322169191 Lactuca sativa
Lsat_1_v5_gn_5_178681 5.0kb downstream 5.0kb downstream 8447   true Lsat_1_v8_lg_5: 322155745-322164191 Lactuca sativa
Lsat_1_v5_gn_5_178681 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 322155745-322160744 Lactuca sativa
Lsat_1_v5_gn_5_178681 10.0kb upstream 10.0kb upstream 13447   true Lsat_1_v8_lg_5: 322160745-322174191 Lactuca sativa
Lsat_1_v5_gn_5_178681 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 322164192-322174191 Lactuca sativa
Lsat_1_v5_gn_5_178681 10.0kb downstream 10.0kb downstream 13447   true Lsat_1_v8_lg_5: 322150745-322164191 Lactuca sativa
Lsat_1_v5_gn_5_178681 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 322150745-322160744 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473274 5263 Asterids View MSA
123739966 5271 Pentapetalae View MSA
122785609 5272 Eudicot View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain