Gene : Lsat_1_v5_gn_5_181040 L. sativa V8
Defline:  (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6) Genomic Order:  4985
Name:  ? Lsat_1_v5_gn_5_181040 Secondary Identifier:  ? PAC:38971119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_181040 0.5kb upstream 0.5kb upstream 3748   true Lsat_1_v8_lg_5: 326254157-326257904 Lactuca sativa
Lsat_1_v5_gn_5_181040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 326254157-326254656 Lactuca sativa
Lsat_1_v5_gn_5_181040 0.5kb downstream 0.5kb downstream 3748   true Lsat_1_v8_lg_5: 326254657-326258404 Lactuca sativa
Lsat_1_v5_gn_5_181040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 326257905-326258404 Lactuca sativa
Lsat_1_v5_gn_5_181040 1.0kb upstream 1.0kb upstream 4248   true Lsat_1_v8_lg_5: 326253657-326257904 Lactuca sativa
Lsat_1_v5_gn_5_181040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 326253657-326254656 Lactuca sativa
Lsat_1_v5_gn_5_181040 1.0kb downstream 1.0kb downstream 4248   true Lsat_1_v8_lg_5: 326254657-326258904 Lactuca sativa
Lsat_1_v5_gn_5_181040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 326257905-326258904 Lactuca sativa
Lsat_1_v5_gn_5_181040 2.0kb upstream 2.0kb upstream 5248   true Lsat_1_v8_lg_5: 326252657-326257904 Lactuca sativa
Lsat_1_v5_gn_5_181040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 326252657-326254656 Lactuca sativa
Lsat_1_v5_gn_5_181040 2.0kb downstream 2.0kb downstream 5248   true Lsat_1_v8_lg_5: 326254657-326259904 Lactuca sativa
Lsat_1_v5_gn_5_181040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 326257905-326259904 Lactuca sativa
Lsat_1_v5_gn_5_181040 5.0kb upstream 5.0kb upstream 8248   true Lsat_1_v8_lg_5: 326249657-326257904 Lactuca sativa
Lsat_1_v5_gn_5_181040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 326249657-326254656 Lactuca sativa
Lsat_1_v5_gn_5_181040 5.0kb downstream 5.0kb downstream 8248   true Lsat_1_v8_lg_5: 326254657-326262904 Lactuca sativa
Lsat_1_v5_gn_5_181040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 326257905-326262904 Lactuca sativa
Lsat_1_v5_gn_5_181040 10.0kb upstream 10.0kb upstream 13248   true Lsat_1_v8_lg_5: 326244657-326257904 Lactuca sativa
Lsat_1_v5_gn_5_181040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 326244657-326254656 Lactuca sativa
Lsat_1_v5_gn_5_181040 10.0kb downstream 10.0kb downstream 13248   true Lsat_1_v8_lg_5: 326254657-326267904 Lactuca sativa
Lsat_1_v5_gn_5_181040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 326257905-326267904 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474731 5263 Asterids View MSA
123740699 5271 Pentapetalae View MSA
122793501 5272 Eudicot View MSA
122048865 5273 Angiosperm View MSA
121348373 5274 Embryophyte View MSA
123425020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain