Gene : Lsat_1_v5_gn_5_180561 L. sativa V8
Defline:  (1 of 2) PTHR33385//PTHR33385:SF4 - FAMILY NOT NAMED // PROTEIN XRI1 Genomic Order:  4937
Name:  ? Lsat_1_v5_gn_5_180561 Secondary Identifier:  ? PAC:38966105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_180561 0.5kb upstream 0.5kb upstream 3204   true Lsat_1_v8_lg_5: 324309884-324313087 Lactuca sativa
Lsat_1_v5_gn_5_180561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 324309884-324310383 Lactuca sativa
Lsat_1_v5_gn_5_180561 0.5kb downstream 0.5kb downstream 3204   true Lsat_1_v8_lg_5: 324310384-324313587 Lactuca sativa
Lsat_1_v5_gn_5_180561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 324313088-324313587 Lactuca sativa
Lsat_1_v5_gn_5_180561 1.0kb upstream 1.0kb upstream 3704   true Lsat_1_v8_lg_5: 324309384-324313087 Lactuca sativa
Lsat_1_v5_gn_5_180561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 324309384-324310383 Lactuca sativa
Lsat_1_v5_gn_5_180561 1.0kb downstream 1.0kb downstream 3704   true Lsat_1_v8_lg_5: 324310384-324314087 Lactuca sativa
Lsat_1_v5_gn_5_180561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 324313088-324314087 Lactuca sativa
Lsat_1_v5_gn_5_180561 2.0kb upstream 2.0kb upstream 4704   true Lsat_1_v8_lg_5: 324308384-324313087 Lactuca sativa
Lsat_1_v5_gn_5_180561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 324308384-324310383 Lactuca sativa
Lsat_1_v5_gn_5_180561 2.0kb downstream 2.0kb downstream 4704   true Lsat_1_v8_lg_5: 324310384-324315087 Lactuca sativa
Lsat_1_v5_gn_5_180561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 324313088-324315087 Lactuca sativa
Lsat_1_v5_gn_5_180561 5.0kb upstream 5.0kb upstream 7704   true Lsat_1_v8_lg_5: 324305384-324313087 Lactuca sativa
Lsat_1_v5_gn_5_180561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 324305384-324310383 Lactuca sativa
Lsat_1_v5_gn_5_180561 5.0kb downstream 5.0kb downstream 7704   true Lsat_1_v8_lg_5: 324310384-324318087 Lactuca sativa
Lsat_1_v5_gn_5_180561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 324313088-324318087 Lactuca sativa
Lsat_1_v5_gn_5_180561 10.0kb upstream 10.0kb upstream 12704   true Lsat_1_v8_lg_5: 324300384-324313087 Lactuca sativa
Lsat_1_v5_gn_5_180561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 324300384-324310383 Lactuca sativa
Lsat_1_v5_gn_5_180561 10.0kb downstream 10.0kb downstream 12704   true Lsat_1_v8_lg_5: 324310384-324323087 Lactuca sativa
Lsat_1_v5_gn_5_180561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 324313088-324323087 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469438 5263 Asterids View MSA
123749670 5271 Pentapetalae View MSA
122786653 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain