Gene : Lsat_1_v5_gn_5_182001 L. sativa V8
Defline:  (1 of 2) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED Genomic Order:  5048
Name:  ? Lsat_1_v5_gn_5_182001 Secondary Identifier:  ? PAC:38969944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_182001 0.5kb upstream 0.5kb upstream 1677   true Lsat_1_v8_lg_5: 328917526-328919202 Lactuca sativa
Lsat_1_v5_gn_5_182001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 328917526-328918025 Lactuca sativa
Lsat_1_v5_gn_5_182001 0.5kb downstream 0.5kb downstream 1677   true Lsat_1_v8_lg_5: 328918026-328919702 Lactuca sativa
Lsat_1_v5_gn_5_182001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 328919203-328919702 Lactuca sativa
Lsat_1_v5_gn_5_182001 1.0kb upstream 1.0kb upstream 2177   true Lsat_1_v8_lg_5: 328917026-328919202 Lactuca sativa
Lsat_1_v5_gn_5_182001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 328917026-328918025 Lactuca sativa
Lsat_1_v5_gn_5_182001 1.0kb downstream 1.0kb downstream 2177   true Lsat_1_v8_lg_5: 328918026-328920202 Lactuca sativa
Lsat_1_v5_gn_5_182001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 328919203-328920202 Lactuca sativa
Lsat_1_v5_gn_5_182001 2.0kb upstream 2.0kb upstream 3177   true Lsat_1_v8_lg_5: 328916026-328919202 Lactuca sativa
Lsat_1_v5_gn_5_182001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 328916026-328918025 Lactuca sativa
Lsat_1_v5_gn_5_182001 2.0kb downstream 2.0kb downstream 3177   true Lsat_1_v8_lg_5: 328918026-328921202 Lactuca sativa
Lsat_1_v5_gn_5_182001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 328919203-328921202 Lactuca sativa
Lsat_1_v5_gn_5_182001 5.0kb upstream 5.0kb upstream 6177   true Lsat_1_v8_lg_5: 328913026-328919202 Lactuca sativa
Lsat_1_v5_gn_5_182001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 328913026-328918025 Lactuca sativa
Lsat_1_v5_gn_5_182001 5.0kb downstream 5.0kb downstream 6177   true Lsat_1_v8_lg_5: 328918026-328924202 Lactuca sativa
Lsat_1_v5_gn_5_182001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 328919203-328924202 Lactuca sativa
Lsat_1_v5_gn_5_182001 10.0kb upstream 10.0kb upstream 11177   true Lsat_1_v8_lg_5: 328908026-328919202 Lactuca sativa
Lsat_1_v5_gn_5_182001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 328908026-328918025 Lactuca sativa
Lsat_1_v5_gn_5_182001 10.0kb downstream 10.0kb downstream 11177   true Lsat_1_v8_lg_5: 328918026-328929202 Lactuca sativa
Lsat_1_v5_gn_5_182001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 328919203-328929202 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
121477833 5263 Asterids View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain