Gene : Lsat_1_v5_gn_5_183400 L. sativa V8
Defline:  (1 of 8) KOG4249 - Uncharacterized conserved protein Genomic Order:  5032
Name:  ? Lsat_1_v5_gn_5_183400 Secondary Identifier:  ? PAC:38967483
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_183400 0.5kb upstream 0.5kb upstream 4474   true Lsat_1_v8_lg_5: 328093556-328098029 Lactuca sativa
Lsat_1_v5_gn_5_183400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 328097530-328098029 Lactuca sativa
Lsat_1_v5_gn_5_183400 0.5kb downstream 0.5kb downstream 4474   true Lsat_1_v8_lg_5: 328093056-328097529 Lactuca sativa
Lsat_1_v5_gn_5_183400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 328093056-328093555 Lactuca sativa
Lsat_1_v5_gn_5_183400 1.0kb upstream 1.0kb upstream 4974   true Lsat_1_v8_lg_5: 328093556-328098529 Lactuca sativa
Lsat_1_v5_gn_5_183400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 328097530-328098529 Lactuca sativa
Lsat_1_v5_gn_5_183400 1.0kb downstream 1.0kb downstream 4974   true Lsat_1_v8_lg_5: 328092556-328097529 Lactuca sativa
Lsat_1_v5_gn_5_183400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 328092556-328093555 Lactuca sativa
Lsat_1_v5_gn_5_183400 2.0kb upstream 2.0kb upstream 5974   true Lsat_1_v8_lg_5: 328093556-328099529 Lactuca sativa
Lsat_1_v5_gn_5_183400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 328097530-328099529 Lactuca sativa
Lsat_1_v5_gn_5_183400 2.0kb downstream 2.0kb downstream 5974   true Lsat_1_v8_lg_5: 328091556-328097529 Lactuca sativa
Lsat_1_v5_gn_5_183400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 328091556-328093555 Lactuca sativa
Lsat_1_v5_gn_5_183400 5.0kb upstream 5.0kb upstream 8974   true Lsat_1_v8_lg_5: 328093556-328102529 Lactuca sativa
Lsat_1_v5_gn_5_183400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 328097530-328102529 Lactuca sativa
Lsat_1_v5_gn_5_183400 5.0kb downstream 5.0kb downstream 8974   true Lsat_1_v8_lg_5: 328088556-328097529 Lactuca sativa
Lsat_1_v5_gn_5_183400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 328088556-328093555 Lactuca sativa
Lsat_1_v5_gn_5_183400 10.0kb upstream 10.0kb upstream 13974   true Lsat_1_v8_lg_5: 328093556-328107529 Lactuca sativa
Lsat_1_v5_gn_5_183400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 328097530-328107529 Lactuca sativa
Lsat_1_v5_gn_5_183400 10.0kb downstream 10.0kb downstream 13974   true Lsat_1_v8_lg_5: 328083556-328097529 Lactuca sativa
Lsat_1_v5_gn_5_183400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 328083556-328093555 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471682 5263 Asterids View MSA
123739166 5271 Pentapetalae View MSA
122791185 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain