Gene : Lsat_1_v5_gn_5_184160 L. sativa V8
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Genomic Order:  5164
Name:  ? Lsat_1_v5_gn_5_184160 Secondary Identifier:  ? PAC:38966806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_184160 0.5kb upstream 0.5kb upstream 2896   true Lsat_1_v8_lg_5: 334568570-334571465 Lactuca sativa
Lsat_1_v5_gn_5_184160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 334568570-334569069 Lactuca sativa
Lsat_1_v5_gn_5_184160 0.5kb downstream 0.5kb downstream 2896   true Lsat_1_v8_lg_5: 334569070-334571965 Lactuca sativa
Lsat_1_v5_gn_5_184160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 334571466-334571965 Lactuca sativa
Lsat_1_v5_gn_5_184160 1.0kb upstream 1.0kb upstream 3396   true Lsat_1_v8_lg_5: 334568070-334571465 Lactuca sativa
Lsat_1_v5_gn_5_184160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 334568070-334569069 Lactuca sativa
Lsat_1_v5_gn_5_184160 1.0kb downstream 1.0kb downstream 3396   true Lsat_1_v8_lg_5: 334569070-334572465 Lactuca sativa
Lsat_1_v5_gn_5_184160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 334571466-334572465 Lactuca sativa
Lsat_1_v5_gn_5_184160 2.0kb upstream 2.0kb upstream 4396   true Lsat_1_v8_lg_5: 334567070-334571465 Lactuca sativa
Lsat_1_v5_gn_5_184160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 334567070-334569069 Lactuca sativa
Lsat_1_v5_gn_5_184160 2.0kb downstream 2.0kb downstream 4396   true Lsat_1_v8_lg_5: 334569070-334573465 Lactuca sativa
Lsat_1_v5_gn_5_184160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 334571466-334573465 Lactuca sativa
Lsat_1_v5_gn_5_184160 5.0kb upstream 5.0kb upstream 7396   true Lsat_1_v8_lg_5: 334564070-334571465 Lactuca sativa
Lsat_1_v5_gn_5_184160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 334564070-334569069 Lactuca sativa
Lsat_1_v5_gn_5_184160 5.0kb downstream 5.0kb downstream 7396   true Lsat_1_v8_lg_5: 334569070-334576465 Lactuca sativa
Lsat_1_v5_gn_5_184160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 334571466-334576465 Lactuca sativa
Lsat_1_v5_gn_5_184160 10.0kb upstream 10.0kb upstream 12396   true Lsat_1_v8_lg_5: 334559070-334571465 Lactuca sativa
Lsat_1_v5_gn_5_184160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 334559070-334569069 Lactuca sativa
Lsat_1_v5_gn_5_184160 10.0kb downstream 10.0kb downstream 12396   true Lsat_1_v8_lg_5: 334569070-334581465 Lactuca sativa
Lsat_1_v5_gn_5_184160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 334571466-334581465 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473260 5263 Asterids View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain