Gene : Lsat_1_v5_gn_5_1881 L. sativa V8
Defline:  (1 of 2) PTHR22811//PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Genomic Order:  56
Name:  ? Lsat_1_v5_gn_5_1881 Secondary Identifier:  ? PAC:38971361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_1881 0.5kb upstream 0.5kb upstream 8057   true Lsat_1_v8_lg_5: 3846889-3854945 Lactuca sativa
Lsat_1_v5_gn_5_1881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 3854446-3854945 Lactuca sativa
Lsat_1_v5_gn_5_1881 0.5kb downstream 0.5kb downstream 8057   true Lsat_1_v8_lg_5: 3846389-3854445 Lactuca sativa
Lsat_1_v5_gn_5_1881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 3846389-3846888 Lactuca sativa
Lsat_1_v5_gn_5_1881 1.0kb upstream 1.0kb upstream 8557   true Lsat_1_v8_lg_5: 3846889-3855445 Lactuca sativa
Lsat_1_v5_gn_5_1881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 3854446-3855445 Lactuca sativa
Lsat_1_v5_gn_5_1881 1.0kb downstream 1.0kb downstream 8557   true Lsat_1_v8_lg_5: 3845889-3854445 Lactuca sativa
Lsat_1_v5_gn_5_1881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 3845889-3846888 Lactuca sativa
Lsat_1_v5_gn_5_1881 2.0kb upstream 2.0kb upstream 9557   true Lsat_1_v8_lg_5: 3846889-3856445 Lactuca sativa
Lsat_1_v5_gn_5_1881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 3854446-3856445 Lactuca sativa
Lsat_1_v5_gn_5_1881 2.0kb downstream 2.0kb downstream 9557   true Lsat_1_v8_lg_5: 3844889-3854445 Lactuca sativa
Lsat_1_v5_gn_5_1881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 3844889-3846888 Lactuca sativa
Lsat_1_v5_gn_5_1881 5.0kb upstream 5.0kb upstream 12557   true Lsat_1_v8_lg_5: 3846889-3859445 Lactuca sativa
Lsat_1_v5_gn_5_1881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 3854446-3859445 Lactuca sativa
Lsat_1_v5_gn_5_1881 5.0kb downstream 5.0kb downstream 12557   true Lsat_1_v8_lg_5: 3841889-3854445 Lactuca sativa
Lsat_1_v5_gn_5_1881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 3841889-3846888 Lactuca sativa
Lsat_1_v5_gn_5_1881 10.0kb upstream 10.0kb upstream 17557   true Lsat_1_v8_lg_5: 3846889-3864445 Lactuca sativa
Lsat_1_v5_gn_5_1881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 3854446-3864445 Lactuca sativa
Lsat_1_v5_gn_5_1881 10.0kb downstream 10.0kb downstream 17557   true Lsat_1_v8_lg_5: 3836889-3854445 Lactuca sativa
Lsat_1_v5_gn_5_1881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 3836889-3846888 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473218 5263 Asterids View MSA
123751948 5271 Pentapetalae View MSA
122788237 5272 Eudicot View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain