Gene : Lsat_1_v5_gn_5_188301 L. sativa V8
Defline:  (1 of 3) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) Genomic Order:  5183
Name:  ? Lsat_1_v5_gn_5_188301 Secondary Identifier:  ? PAC:38964923
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_188301 0.5kb upstream 0.5kb upstream 5608   true Lsat_1_v8_lg_5: 335081922-335087529 Lactuca sativa
Lsat_1_v5_gn_5_188301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 335087030-335087529 Lactuca sativa
Lsat_1_v5_gn_5_188301 0.5kb downstream 0.5kb downstream 5608   true Lsat_1_v8_lg_5: 335081422-335087029 Lactuca sativa
Lsat_1_v5_gn_5_188301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 335081422-335081921 Lactuca sativa
Lsat_1_v5_gn_5_188301 1.0kb upstream 1.0kb upstream 6108   true Lsat_1_v8_lg_5: 335081922-335088029 Lactuca sativa
Lsat_1_v5_gn_5_188301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 335087030-335088029 Lactuca sativa
Lsat_1_v5_gn_5_188301 1.0kb downstream 1.0kb downstream 6108   true Lsat_1_v8_lg_5: 335080922-335087029 Lactuca sativa
Lsat_1_v5_gn_5_188301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 335080922-335081921 Lactuca sativa
Lsat_1_v5_gn_5_188301 2.0kb upstream 2.0kb upstream 7108   true Lsat_1_v8_lg_5: 335081922-335089029 Lactuca sativa
Lsat_1_v5_gn_5_188301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 335087030-335089029 Lactuca sativa
Lsat_1_v5_gn_5_188301 2.0kb downstream 2.0kb downstream 7108   true Lsat_1_v8_lg_5: 335079922-335087029 Lactuca sativa
Lsat_1_v5_gn_5_188301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 335079922-335081921 Lactuca sativa
Lsat_1_v5_gn_5_188301 5.0kb upstream 5.0kb upstream 10108   true Lsat_1_v8_lg_5: 335081922-335092029 Lactuca sativa
Lsat_1_v5_gn_5_188301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 335087030-335092029 Lactuca sativa
Lsat_1_v5_gn_5_188301 5.0kb downstream 5.0kb downstream 10108   true Lsat_1_v8_lg_5: 335076922-335087029 Lactuca sativa
Lsat_1_v5_gn_5_188301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 335076922-335081921 Lactuca sativa
Lsat_1_v5_gn_5_188301 10.0kb upstream 10.0kb upstream 15108   true Lsat_1_v8_lg_5: 335081922-335097029 Lactuca sativa
Lsat_1_v5_gn_5_188301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 335087030-335097029 Lactuca sativa
Lsat_1_v5_gn_5_188301 10.0kb downstream 10.0kb downstream 15108   true Lsat_1_v8_lg_5: 335071922-335087029 Lactuca sativa
Lsat_1_v5_gn_5_188301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 335071922-335081921 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468541 5263 Asterids View MSA
123746250 5271 Pentapetalae View MSA
122793310 5272 Eudicot View MSA
122043927 5273 Angiosperm View MSA
121347375 5274 Embryophyte View MSA
123428304 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain