Gene : Lsat_1_v5_gn_5_187481 L. sativa V8
Defline:  (1 of 1) K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) Genomic Order:  5200
Name:  ? Lsat_1_v5_gn_5_187481 Secondary Identifier:  ? PAC:38965497
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_187481 0.5kb upstream 0.5kb upstream 1814   true Lsat_1_v8_lg_5: 335864518-335866331 Lactuca sativa
Lsat_1_v5_gn_5_187481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 335864518-335865017 Lactuca sativa
Lsat_1_v5_gn_5_187481 0.5kb downstream 0.5kb downstream 1814   true Lsat_1_v8_lg_5: 335865018-335866831 Lactuca sativa
Lsat_1_v5_gn_5_187481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 335866332-335866831 Lactuca sativa
Lsat_1_v5_gn_5_187481 1.0kb upstream 1.0kb upstream 2314   true Lsat_1_v8_lg_5: 335864018-335866331 Lactuca sativa
Lsat_1_v5_gn_5_187481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 335864018-335865017 Lactuca sativa
Lsat_1_v5_gn_5_187481 1.0kb downstream 1.0kb downstream 2314   true Lsat_1_v8_lg_5: 335865018-335867331 Lactuca sativa
Lsat_1_v5_gn_5_187481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 335866332-335867331 Lactuca sativa
Lsat_1_v5_gn_5_187481 2.0kb upstream 2.0kb upstream 3314   true Lsat_1_v8_lg_5: 335863018-335866331 Lactuca sativa
Lsat_1_v5_gn_5_187481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 335863018-335865017 Lactuca sativa
Lsat_1_v5_gn_5_187481 2.0kb downstream 2.0kb downstream 3314   true Lsat_1_v8_lg_5: 335865018-335868331 Lactuca sativa
Lsat_1_v5_gn_5_187481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 335866332-335868331 Lactuca sativa
Lsat_1_v5_gn_5_187481 5.0kb upstream 5.0kb upstream 6314   true Lsat_1_v8_lg_5: 335860018-335866331 Lactuca sativa
Lsat_1_v5_gn_5_187481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 335860018-335865017 Lactuca sativa
Lsat_1_v5_gn_5_187481 5.0kb downstream 5.0kb downstream 6314   true Lsat_1_v8_lg_5: 335865018-335871331 Lactuca sativa
Lsat_1_v5_gn_5_187481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 335866332-335871331 Lactuca sativa
Lsat_1_v5_gn_5_187481 10.0kb upstream 10.0kb upstream 11314   true Lsat_1_v8_lg_5: 335855018-335866331 Lactuca sativa
Lsat_1_v5_gn_5_187481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 335855018-335865017 Lactuca sativa
Lsat_1_v5_gn_5_187481 10.0kb downstream 10.0kb downstream 11314   true Lsat_1_v8_lg_5: 335865018-335876331 Lactuca sativa
Lsat_1_v5_gn_5_187481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 335866332-335876331 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472570 5263 Asterids View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain