Gene : Lsat_1_v5_gn_5_188760 L. sativa V8
Defline:  (1 of 1) K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Genomic Order:  5233
Name:  ? Lsat_1_v5_gn_5_188760 Secondary Identifier:  ? PAC:38969349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_188760 0.5kb upstream 0.5kb upstream 2361   true Lsat_1_v8_lg_5: 336906874-336909234 Lactuca sativa
Lsat_1_v5_gn_5_188760 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 336906874-336907373 Lactuca sativa
Lsat_1_v5_gn_5_188760 0.5kb downstream 0.5kb downstream 2361   true Lsat_1_v8_lg_5: 336907374-336909734 Lactuca sativa
Lsat_1_v5_gn_5_188760 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 336909235-336909734 Lactuca sativa
Lsat_1_v5_gn_5_188760 1.0kb upstream 1.0kb upstream 2861   true Lsat_1_v8_lg_5: 336906374-336909234 Lactuca sativa
Lsat_1_v5_gn_5_188760 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 336906374-336907373 Lactuca sativa
Lsat_1_v5_gn_5_188760 1.0kb downstream 1.0kb downstream 2861   true Lsat_1_v8_lg_5: 336907374-336910234 Lactuca sativa
Lsat_1_v5_gn_5_188760 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 336909235-336910234 Lactuca sativa
Lsat_1_v5_gn_5_188760 2.0kb upstream 2.0kb upstream 3861   true Lsat_1_v8_lg_5: 336905374-336909234 Lactuca sativa
Lsat_1_v5_gn_5_188760 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 336905374-336907373 Lactuca sativa
Lsat_1_v5_gn_5_188760 2.0kb downstream 2.0kb downstream 3861   true Lsat_1_v8_lg_5: 336907374-336911234 Lactuca sativa
Lsat_1_v5_gn_5_188760 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 336909235-336911234 Lactuca sativa
Lsat_1_v5_gn_5_188760 5.0kb upstream 5.0kb upstream 6861   true Lsat_1_v8_lg_5: 336902374-336909234 Lactuca sativa
Lsat_1_v5_gn_5_188760 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 336902374-336907373 Lactuca sativa
Lsat_1_v5_gn_5_188760 5.0kb downstream 5.0kb downstream 6861   true Lsat_1_v8_lg_5: 336907374-336914234 Lactuca sativa
Lsat_1_v5_gn_5_188760 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 336909235-336914234 Lactuca sativa
Lsat_1_v5_gn_5_188760 10.0kb upstream 10.0kb upstream 11861   true Lsat_1_v8_lg_5: 336897374-336909234 Lactuca sativa
Lsat_1_v5_gn_5_188760 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 336897374-336907373 Lactuca sativa
Lsat_1_v5_gn_5_188760 10.0kb downstream 10.0kb downstream 11861   true Lsat_1_v8_lg_5: 336907374-336919234 Lactuca sativa
Lsat_1_v5_gn_5_188760 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 336909235-336919234 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475743 5263 Asterids View MSA
123747272 5271 Pentapetalae View MSA
122794808 5272 Eudicot View MSA
122048788 5273 Angiosperm View MSA
121348287 5274 Embryophyte View MSA
123425878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain