Gene : Lsat_1_v5_gn_5_15041 L. sativa V8
Defline:  (1 of 1) PTHR12326//PTHR12326:SF3 - PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN // DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG Genomic Order:  425
Name:  ? Lsat_1_v5_gn_5_15041 Secondary Identifier:  ? PAC:38963723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_15041 0.5kb upstream 0.5kb upstream 5145   true Lsat_1_v8_lg_5: 33115877-33121021 Lactuca sativa
Lsat_1_v5_gn_5_15041 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 33115877-33116376 Lactuca sativa
Lsat_1_v5_gn_5_15041 0.5kb downstream 0.5kb downstream 5145   true Lsat_1_v8_lg_5: 33116377-33121521 Lactuca sativa
Lsat_1_v5_gn_5_15041 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 33121022-33121521 Lactuca sativa
Lsat_1_v5_gn_5_15041 1.0kb upstream 1.0kb upstream 5645   true Lsat_1_v8_lg_5: 33115377-33121021 Lactuca sativa
Lsat_1_v5_gn_5_15041 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 33115377-33116376 Lactuca sativa
Lsat_1_v5_gn_5_15041 1.0kb downstream 1.0kb downstream 5645   true Lsat_1_v8_lg_5: 33116377-33122021 Lactuca sativa
Lsat_1_v5_gn_5_15041 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 33121022-33122021 Lactuca sativa
Lsat_1_v5_gn_5_15041 2.0kb upstream 2.0kb upstream 6645   true Lsat_1_v8_lg_5: 33114377-33121021 Lactuca sativa
Lsat_1_v5_gn_5_15041 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 33114377-33116376 Lactuca sativa
Lsat_1_v5_gn_5_15041 2.0kb downstream 2.0kb downstream 6645   true Lsat_1_v8_lg_5: 33116377-33123021 Lactuca sativa
Lsat_1_v5_gn_5_15041 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 33121022-33123021 Lactuca sativa
Lsat_1_v5_gn_5_15041 5.0kb upstream 5.0kb upstream 9645   true Lsat_1_v8_lg_5: 33111377-33121021 Lactuca sativa
Lsat_1_v5_gn_5_15041 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 33111377-33116376 Lactuca sativa
Lsat_1_v5_gn_5_15041 5.0kb downstream 5.0kb downstream 9645   true Lsat_1_v8_lg_5: 33116377-33126021 Lactuca sativa
Lsat_1_v5_gn_5_15041 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 33121022-33126021 Lactuca sativa
Lsat_1_v5_gn_5_15041 10.0kb upstream 10.0kb upstream 14645   true Lsat_1_v8_lg_5: 33106377-33121021 Lactuca sativa
Lsat_1_v5_gn_5_15041 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 33106377-33116376 Lactuca sativa
Lsat_1_v5_gn_5_15041 10.0kb downstream 10.0kb downstream 14645   true Lsat_1_v8_lg_5: 33116377-33131021 Lactuca sativa
Lsat_1_v5_gn_5_15041 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 33121022-33131021 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478614 5263 Asterids View MSA
123737398 5271 Pentapetalae View MSA
122793571 5272 Eudicot View MSA
122042332 5273 Angiosperm View MSA
121350531 5274 Embryophyte View MSA
123381775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain