Gene : Lsat_1_v5_gn_5_1520 L. sativa V8
Defline:  (1 of 3) PF01426//PF05641 - BAH domain (BAH) // Agenet domain (Agenet) Genomic Order:  39
Name:  ? Lsat_1_v5_gn_5_1520 Secondary Identifier:  ? PAC:38965692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_1520 0.5kb upstream 0.5kb upstream 4916   true Lsat_1_v8_lg_5: 2690585-2695500 Lactuca sativa
Lsat_1_v5_gn_5_1520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 2695001-2695500 Lactuca sativa
Lsat_1_v5_gn_5_1520 0.5kb downstream 0.5kb downstream 4916   true Lsat_1_v8_lg_5: 2690085-2695000 Lactuca sativa
Lsat_1_v5_gn_5_1520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 2690085-2690584 Lactuca sativa
Lsat_1_v5_gn_5_1520 1.0kb upstream 1.0kb upstream 5416   true Lsat_1_v8_lg_5: 2690585-2696000 Lactuca sativa
Lsat_1_v5_gn_5_1520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 2695001-2696000 Lactuca sativa
Lsat_1_v5_gn_5_1520 1.0kb downstream 1.0kb downstream 5416   true Lsat_1_v8_lg_5: 2689585-2695000 Lactuca sativa
Lsat_1_v5_gn_5_1520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 2689585-2690584 Lactuca sativa
Lsat_1_v5_gn_5_1520 2.0kb upstream 2.0kb upstream 6416   true Lsat_1_v8_lg_5: 2690585-2697000 Lactuca sativa
Lsat_1_v5_gn_5_1520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 2695001-2697000 Lactuca sativa
Lsat_1_v5_gn_5_1520 2.0kb downstream 2.0kb downstream 6416   true Lsat_1_v8_lg_5: 2688585-2695000 Lactuca sativa
Lsat_1_v5_gn_5_1520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 2688585-2690584 Lactuca sativa
Lsat_1_v5_gn_5_1520 5.0kb upstream 5.0kb upstream 9416   true Lsat_1_v8_lg_5: 2690585-2700000 Lactuca sativa
Lsat_1_v5_gn_5_1520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 2695001-2700000 Lactuca sativa
Lsat_1_v5_gn_5_1520 5.0kb downstream 5.0kb downstream 9416   true Lsat_1_v8_lg_5: 2685585-2695000 Lactuca sativa
Lsat_1_v5_gn_5_1520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 2685585-2690584 Lactuca sativa
Lsat_1_v5_gn_5_1520 10.0kb upstream 10.0kb upstream 14416   true Lsat_1_v8_lg_5: 2690585-2705000 Lactuca sativa
Lsat_1_v5_gn_5_1520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 2695001-2705000 Lactuca sativa
Lsat_1_v5_gn_5_1520 10.0kb downstream 10.0kb downstream 14416   true Lsat_1_v8_lg_5: 2680585-2695000 Lactuca sativa
Lsat_1_v5_gn_5_1520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 2680585-2690584 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471786 5263 Asterids View MSA
123742959 5271 Pentapetalae View MSA
122786842 5272 Eudicot View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain