Gene : Lsat_1_v5_gn_5_155300 L. sativa V8
Defline:  (1 of 4) PF06127 - Protein of unknown function (DUF962) (DUF962) Genomic Order:  4221
Name:  ? Lsat_1_v5_gn_5_155300 Secondary Identifier:  ? PAC:38967474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_155300 0.5kb upstream 0.5kb upstream 3104   true Lsat_1_v8_lg_5: 291450316-291453419 Lactuca sativa
Lsat_1_v5_gn_5_155300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 291452920-291453419 Lactuca sativa
Lsat_1_v5_gn_5_155300 0.5kb downstream 0.5kb downstream 3104   true Lsat_1_v8_lg_5: 291449816-291452919 Lactuca sativa
Lsat_1_v5_gn_5_155300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 291449816-291450315 Lactuca sativa
Lsat_1_v5_gn_5_155300 1.0kb upstream 1.0kb upstream 3604   true Lsat_1_v8_lg_5: 291450316-291453919 Lactuca sativa
Lsat_1_v5_gn_5_155300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 291452920-291453919 Lactuca sativa
Lsat_1_v5_gn_5_155300 1.0kb downstream 1.0kb downstream 3604   true Lsat_1_v8_lg_5: 291449316-291452919 Lactuca sativa
Lsat_1_v5_gn_5_155300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 291449316-291450315 Lactuca sativa
Lsat_1_v5_gn_5_155300 2.0kb upstream 2.0kb upstream 4604   true Lsat_1_v8_lg_5: 291450316-291454919 Lactuca sativa
Lsat_1_v5_gn_5_155300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 291452920-291454919 Lactuca sativa
Lsat_1_v5_gn_5_155300 2.0kb downstream 2.0kb downstream 4604   true Lsat_1_v8_lg_5: 291448316-291452919 Lactuca sativa
Lsat_1_v5_gn_5_155300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 291448316-291450315 Lactuca sativa
Lsat_1_v5_gn_5_155300 5.0kb upstream 5.0kb upstream 7604   true Lsat_1_v8_lg_5: 291450316-291457919 Lactuca sativa
Lsat_1_v5_gn_5_155300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 291452920-291457919 Lactuca sativa
Lsat_1_v5_gn_5_155300 5.0kb downstream 5.0kb downstream 7604   true Lsat_1_v8_lg_5: 291445316-291452919 Lactuca sativa
Lsat_1_v5_gn_5_155300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 291445316-291450315 Lactuca sativa
Lsat_1_v5_gn_5_155300 10.0kb upstream 10.0kb upstream 12604   true Lsat_1_v8_lg_5: 291450316-291462919 Lactuca sativa
Lsat_1_v5_gn_5_155300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 291452920-291462919 Lactuca sativa
Lsat_1_v5_gn_5_155300 10.0kb downstream 10.0kb downstream 12604   true Lsat_1_v8_lg_5: 291440316-291452919 Lactuca sativa
Lsat_1_v5_gn_5_155300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 291440316-291450315 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472048 5263 Asterids View MSA
123745593 5271 Pentapetalae View MSA
122787415 5272 Eudicot View MSA
122044041 5273 Angiosperm View MSA
121350292 5274 Embryophyte View MSA
123424531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain