Gene : Lsat_1_v5_gn_5_155160 L. sativa V8
Defline:  (1 of 5) K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) Genomic Order:  4227
Name:  ? Lsat_1_v5_gn_5_155160 Secondary Identifier:  ? PAC:38966517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_155160 0.5kb upstream 0.5kb upstream 4887   true Lsat_1_v8_lg_5: 291810808-291815694 Lactuca sativa
Lsat_1_v5_gn_5_155160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 291815195-291815694 Lactuca sativa
Lsat_1_v5_gn_5_155160 0.5kb downstream 0.5kb downstream 4887   true Lsat_1_v8_lg_5: 291810308-291815194 Lactuca sativa
Lsat_1_v5_gn_5_155160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 291810308-291810807 Lactuca sativa
Lsat_1_v5_gn_5_155160 1.0kb upstream 1.0kb upstream 5387   true Lsat_1_v8_lg_5: 291810808-291816194 Lactuca sativa
Lsat_1_v5_gn_5_155160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 291815195-291816194 Lactuca sativa
Lsat_1_v5_gn_5_155160 1.0kb downstream 1.0kb downstream 5387   true Lsat_1_v8_lg_5: 291809808-291815194 Lactuca sativa
Lsat_1_v5_gn_5_155160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 291809808-291810807 Lactuca sativa
Lsat_1_v5_gn_5_155160 2.0kb upstream 2.0kb upstream 6387   true Lsat_1_v8_lg_5: 291810808-291817194 Lactuca sativa
Lsat_1_v5_gn_5_155160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 291815195-291817194 Lactuca sativa
Lsat_1_v5_gn_5_155160 2.0kb downstream 2.0kb downstream 6387   true Lsat_1_v8_lg_5: 291808808-291815194 Lactuca sativa
Lsat_1_v5_gn_5_155160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 291808808-291810807 Lactuca sativa
Lsat_1_v5_gn_5_155160 5.0kb upstream 5.0kb upstream 9387   true Lsat_1_v8_lg_5: 291810808-291820194 Lactuca sativa
Lsat_1_v5_gn_5_155160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 291815195-291820194 Lactuca sativa
Lsat_1_v5_gn_5_155160 5.0kb downstream 5.0kb downstream 9387   true Lsat_1_v8_lg_5: 291805808-291815194 Lactuca sativa
Lsat_1_v5_gn_5_155160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 291805808-291810807 Lactuca sativa
Lsat_1_v5_gn_5_155160 10.0kb upstream 10.0kb upstream 14387   true Lsat_1_v8_lg_5: 291810808-291825194 Lactuca sativa
Lsat_1_v5_gn_5_155160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 291815195-291825194 Lactuca sativa
Lsat_1_v5_gn_5_155160 10.0kb downstream 10.0kb downstream 14387   true Lsat_1_v8_lg_5: 291800808-291815194 Lactuca sativa
Lsat_1_v5_gn_5_155160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 291800808-291810807 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475532 5263 Asterids View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain