Gene : Lsat_1_v5_gn_5_158220 L. sativa V8
Defline:  (1 of 5) PTHR13935:SF41 - ACHAETE-SCUTE HOMOLOG 3 Genomic Order:  4326
Name:  ? Lsat_1_v5_gn_5_158220 Secondary Identifier:  ? PAC:38971444
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_158220 0.5kb upstream 0.5kb upstream 1861   true Lsat_1_v8_lg_5: 296353998-296355858 Lactuca sativa
Lsat_1_v5_gn_5_158220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 296355359-296355858 Lactuca sativa
Lsat_1_v5_gn_5_158220 0.5kb downstream 0.5kb downstream 1861   true Lsat_1_v8_lg_5: 296353498-296355358 Lactuca sativa
Lsat_1_v5_gn_5_158220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 296353498-296353997 Lactuca sativa
Lsat_1_v5_gn_5_158220 1.0kb upstream 1.0kb upstream 2361   true Lsat_1_v8_lg_5: 296353998-296356358 Lactuca sativa
Lsat_1_v5_gn_5_158220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 296355359-296356358 Lactuca sativa
Lsat_1_v5_gn_5_158220 1.0kb downstream 1.0kb downstream 2361   true Lsat_1_v8_lg_5: 296352998-296355358 Lactuca sativa
Lsat_1_v5_gn_5_158220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 296352998-296353997 Lactuca sativa
Lsat_1_v5_gn_5_158220 2.0kb upstream 2.0kb upstream 3361   true Lsat_1_v8_lg_5: 296353998-296357358 Lactuca sativa
Lsat_1_v5_gn_5_158220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 296355359-296357358 Lactuca sativa
Lsat_1_v5_gn_5_158220 2.0kb downstream 2.0kb downstream 3361   true Lsat_1_v8_lg_5: 296351998-296355358 Lactuca sativa
Lsat_1_v5_gn_5_158220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 296351998-296353997 Lactuca sativa
Lsat_1_v5_gn_5_158220 5.0kb upstream 5.0kb upstream 6361   true Lsat_1_v8_lg_5: 296353998-296360358 Lactuca sativa
Lsat_1_v5_gn_5_158220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 296355359-296360358 Lactuca sativa
Lsat_1_v5_gn_5_158220 5.0kb downstream 5.0kb downstream 6361   true Lsat_1_v8_lg_5: 296348998-296355358 Lactuca sativa
Lsat_1_v5_gn_5_158220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 296348998-296353997 Lactuca sativa
Lsat_1_v5_gn_5_158220 10.0kb upstream 10.0kb upstream 11361   true Lsat_1_v8_lg_5: 296353998-296365358 Lactuca sativa
Lsat_1_v5_gn_5_158220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 296355359-296365358 Lactuca sativa
Lsat_1_v5_gn_5_158220 10.0kb downstream 10.0kb downstream 11361   true Lsat_1_v8_lg_5: 296343998-296355358 Lactuca sativa
Lsat_1_v5_gn_5_158220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 296343998-296353997 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473400 5263 Asterids View MSA
123751421 5271 Pentapetalae View MSA
122790904 5272 Eudicot View MSA
122049440 5273 Angiosperm View MSA
121311403 5274 Embryophyte View MSA
123348704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain