Gene : Lsat_1_v5_gn_5_160700 L. sativa V8
Defline:  (1 of 2) PTHR13878:SF53 - CYTOKININ DEHYDROGENASE 6 Genomic Order:  4378
Name:  ? Lsat_1_v5_gn_5_160700 Secondary Identifier:  ? PAC:38971520
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_160700 0.5kb upstream 0.5kb upstream 3554   true Lsat_1_v8_lg_5: 299500353-299503906 Lactuca sativa
Lsat_1_v5_gn_5_160700 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 299500353-299500852 Lactuca sativa
Lsat_1_v5_gn_5_160700 0.5kb downstream 0.5kb downstream 3554   true Lsat_1_v8_lg_5: 299500853-299504406 Lactuca sativa
Lsat_1_v5_gn_5_160700 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 299503907-299504406 Lactuca sativa
Lsat_1_v5_gn_5_160700 1.0kb upstream 1.0kb upstream 4054   true Lsat_1_v8_lg_5: 299499853-299503906 Lactuca sativa
Lsat_1_v5_gn_5_160700 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 299499853-299500852 Lactuca sativa
Lsat_1_v5_gn_5_160700 1.0kb downstream 1.0kb downstream 4054   true Lsat_1_v8_lg_5: 299500853-299504906 Lactuca sativa
Lsat_1_v5_gn_5_160700 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 299503907-299504906 Lactuca sativa
Lsat_1_v5_gn_5_160700 2.0kb upstream 2.0kb upstream 5054   true Lsat_1_v8_lg_5: 299498853-299503906 Lactuca sativa
Lsat_1_v5_gn_5_160700 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 299498853-299500852 Lactuca sativa
Lsat_1_v5_gn_5_160700 2.0kb downstream 2.0kb downstream 5054   true Lsat_1_v8_lg_5: 299500853-299505906 Lactuca sativa
Lsat_1_v5_gn_5_160700 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 299503907-299505906 Lactuca sativa
Lsat_1_v5_gn_5_160700 5.0kb upstream 5.0kb upstream 8054   true Lsat_1_v8_lg_5: 299495853-299503906 Lactuca sativa
Lsat_1_v5_gn_5_160700 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 299495853-299500852 Lactuca sativa
Lsat_1_v5_gn_5_160700 5.0kb downstream 5.0kb downstream 8054   true Lsat_1_v8_lg_5: 299500853-299508906 Lactuca sativa
Lsat_1_v5_gn_5_160700 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 299503907-299508906 Lactuca sativa
Lsat_1_v5_gn_5_160700 10.0kb upstream 10.0kb upstream 13054   true Lsat_1_v8_lg_5: 299490853-299503906 Lactuca sativa
Lsat_1_v5_gn_5_160700 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 299490853-299500852 Lactuca sativa
Lsat_1_v5_gn_5_160700 10.0kb downstream 10.0kb downstream 13054   true Lsat_1_v8_lg_5: 299500853-299513906 Lactuca sativa
Lsat_1_v5_gn_5_160700 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 299503907-299513906 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480050 5263 Asterids View MSA
123739719 5271 Pentapetalae View MSA
122789559 5272 Eudicot View MSA
122043660 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain