Gene : Lsat_1_v5_gn_5_159560 L. sativa V8
Defline:  (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase Genomic Order:  4335
Name:  ? Lsat_1_v5_gn_5_159560 Secondary Identifier:  ? PAC:38967386
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa VALDEG-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_159560 0.5kb upstream 0.5kb upstream 13388   true Lsat_1_v8_lg_5: 296871596-296884983 Lactuca sativa
Lsat_1_v5_gn_5_159560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 296884484-296884983 Lactuca sativa
Lsat_1_v5_gn_5_159560 0.5kb downstream 0.5kb downstream 13388   true Lsat_1_v8_lg_5: 296871096-296884483 Lactuca sativa
Lsat_1_v5_gn_5_159560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 296871096-296871595 Lactuca sativa
Lsat_1_v5_gn_5_159560 1.0kb upstream 1.0kb upstream 13888   true Lsat_1_v8_lg_5: 296871596-296885483 Lactuca sativa
Lsat_1_v5_gn_5_159560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 296884484-296885483 Lactuca sativa
Lsat_1_v5_gn_5_159560 1.0kb downstream 1.0kb downstream 13888   true Lsat_1_v8_lg_5: 296870596-296884483 Lactuca sativa
Lsat_1_v5_gn_5_159560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 296870596-296871595 Lactuca sativa
Lsat_1_v5_gn_5_159560 2.0kb upstream 2.0kb upstream 14888   true Lsat_1_v8_lg_5: 296871596-296886483 Lactuca sativa
Lsat_1_v5_gn_5_159560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 296884484-296886483 Lactuca sativa
Lsat_1_v5_gn_5_159560 2.0kb downstream 2.0kb downstream 14888   true Lsat_1_v8_lg_5: 296869596-296884483 Lactuca sativa
Lsat_1_v5_gn_5_159560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 296869596-296871595 Lactuca sativa
Lsat_1_v5_gn_5_159560 5.0kb upstream 5.0kb upstream 17888   true Lsat_1_v8_lg_5: 296871596-296889483 Lactuca sativa
Lsat_1_v5_gn_5_159560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 296884484-296889483 Lactuca sativa
Lsat_1_v5_gn_5_159560 5.0kb downstream 5.0kb downstream 17888   true Lsat_1_v8_lg_5: 296866596-296884483 Lactuca sativa
Lsat_1_v5_gn_5_159560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 296866596-296871595 Lactuca sativa
Lsat_1_v5_gn_5_159560 10.0kb upstream 10.0kb upstream 22888   true Lsat_1_v8_lg_5: 296871596-296894483 Lactuca sativa
Lsat_1_v5_gn_5_159560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 296884484-296894483 Lactuca sativa
Lsat_1_v5_gn_5_159560 10.0kb downstream 10.0kb downstream 22888   true Lsat_1_v8_lg_5: 296861596-296884483 Lactuca sativa
Lsat_1_v5_gn_5_159560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 296861596-296871595 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466493 5263 Asterids View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain