Gene : Lsat_1_v5_gn_5_161241 L. sativa V8
Defline:  (1 of 2) K00384 - thioredoxin reductase (NADPH) (trxB) Genomic Order:  4447
Name:  ? Lsat_1_v5_gn_5_161241 Secondary Identifier:  ? PAC:38965086
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa THIOREDOX-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_161241 0.5kb upstream 0.5kb upstream 4256   true Lsat_1_v8_lg_5: 302227523-302231778 Lactuca sativa
Lsat_1_v5_gn_5_161241 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 302227523-302228022 Lactuca sativa
Lsat_1_v5_gn_5_161241 0.5kb downstream 0.5kb downstream 4256   true Lsat_1_v8_lg_5: 302228023-302232278 Lactuca sativa
Lsat_1_v5_gn_5_161241 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 302231779-302232278 Lactuca sativa
Lsat_1_v5_gn_5_161241 1.0kb upstream 1.0kb upstream 4756   true Lsat_1_v8_lg_5: 302227023-302231778 Lactuca sativa
Lsat_1_v5_gn_5_161241 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 302227023-302228022 Lactuca sativa
Lsat_1_v5_gn_5_161241 1.0kb downstream 1.0kb downstream 4756   true Lsat_1_v8_lg_5: 302228023-302232778 Lactuca sativa
Lsat_1_v5_gn_5_161241 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 302231779-302232778 Lactuca sativa
Lsat_1_v5_gn_5_161241 2.0kb upstream 2.0kb upstream 5756   true Lsat_1_v8_lg_5: 302226023-302231778 Lactuca sativa
Lsat_1_v5_gn_5_161241 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 302226023-302228022 Lactuca sativa
Lsat_1_v5_gn_5_161241 2.0kb downstream 2.0kb downstream 5756   true Lsat_1_v8_lg_5: 302228023-302233778 Lactuca sativa
Lsat_1_v5_gn_5_161241 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 302231779-302233778 Lactuca sativa
Lsat_1_v5_gn_5_161241 5.0kb upstream 5.0kb upstream 8756   true Lsat_1_v8_lg_5: 302223023-302231778 Lactuca sativa
Lsat_1_v5_gn_5_161241 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 302223023-302228022 Lactuca sativa
Lsat_1_v5_gn_5_161241 5.0kb downstream 5.0kb downstream 8756   true Lsat_1_v8_lg_5: 302228023-302236778 Lactuca sativa
Lsat_1_v5_gn_5_161241 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 302231779-302236778 Lactuca sativa
Lsat_1_v5_gn_5_161241 10.0kb upstream 10.0kb upstream 13756   true Lsat_1_v8_lg_5: 302218023-302231778 Lactuca sativa
Lsat_1_v5_gn_5_161241 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 302218023-302228022 Lactuca sativa
Lsat_1_v5_gn_5_161241 10.0kb downstream 10.0kb downstream 13756   true Lsat_1_v8_lg_5: 302228023-302241778 Lactuca sativa
Lsat_1_v5_gn_5_161241 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 302231779-302241778 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470913 5263 Asterids View MSA
123745502 5271 Pentapetalae View MSA
122789428 5272 Eudicot View MSA
122046832 5273 Angiosperm View MSA
121345870 5274 Embryophyte View MSA
123426423 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain