Gene : Lsat_1_v5_gn_5_16121 L. sativa V8
Defline:  (1 of 1) K02126 - F-type H+-transporting ATPase subunit a (ATPeF0A, MTATP6, ATP6) Genomic Order:  468
Name:  ? Lsat_1_v5_gn_5_16121 Secondary Identifier:  ? PAC:38964956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_16121 0.5kb upstream 0.5kb upstream 5357   true Lsat_1_v8_lg_5: 35865916-35871272 Lactuca sativa
Lsat_1_v5_gn_5_16121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 35865916-35866415 Lactuca sativa
Lsat_1_v5_gn_5_16121 0.5kb downstream 0.5kb downstream 5357   true Lsat_1_v8_lg_5: 35866416-35871772 Lactuca sativa
Lsat_1_v5_gn_5_16121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 35871273-35871772 Lactuca sativa
Lsat_1_v5_gn_5_16121 1.0kb upstream 1.0kb upstream 5857   true Lsat_1_v8_lg_5: 35865416-35871272 Lactuca sativa
Lsat_1_v5_gn_5_16121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 35865416-35866415 Lactuca sativa
Lsat_1_v5_gn_5_16121 1.0kb downstream 1.0kb downstream 5857   true Lsat_1_v8_lg_5: 35866416-35872272 Lactuca sativa
Lsat_1_v5_gn_5_16121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 35871273-35872272 Lactuca sativa
Lsat_1_v5_gn_5_16121 2.0kb upstream 2.0kb upstream 6857   true Lsat_1_v8_lg_5: 35864416-35871272 Lactuca sativa
Lsat_1_v5_gn_5_16121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 35864416-35866415 Lactuca sativa
Lsat_1_v5_gn_5_16121 2.0kb downstream 2.0kb downstream 6857   true Lsat_1_v8_lg_5: 35866416-35873272 Lactuca sativa
Lsat_1_v5_gn_5_16121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 35871273-35873272 Lactuca sativa
Lsat_1_v5_gn_5_16121 5.0kb upstream 5.0kb upstream 9857   true Lsat_1_v8_lg_5: 35861416-35871272 Lactuca sativa
Lsat_1_v5_gn_5_16121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 35861416-35866415 Lactuca sativa
Lsat_1_v5_gn_5_16121 5.0kb downstream 5.0kb downstream 9857   true Lsat_1_v8_lg_5: 35866416-35876272 Lactuca sativa
Lsat_1_v5_gn_5_16121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 35871273-35876272 Lactuca sativa
Lsat_1_v5_gn_5_16121 10.0kb upstream 10.0kb upstream 14857   true Lsat_1_v8_lg_5: 35856416-35871272 Lactuca sativa
Lsat_1_v5_gn_5_16121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 35856416-35866415 Lactuca sativa
Lsat_1_v5_gn_5_16121 10.0kb downstream 10.0kb downstream 14857   true Lsat_1_v8_lg_5: 35866416-35881272 Lactuca sativa
Lsat_1_v5_gn_5_16121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 35871273-35881272 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027688 5273 Angiosperm View MSA
121480701 5263 Asterids View MSA
123753267 5271 Pentapetalae View MSA
122795405 5272 Eudicot View MSA
121350239 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain