Gene : Lsat_1_v5_gn_5_161180 L. sativa V8
Defline:  (1 of 1) PTHR12668//PTHR12668:SF18 - TRANSMEMBRANE PROTEIN 14, 15 // SUBFAMILY NOT NAMED Genomic Order:  4374
Name:  ? Lsat_1_v5_gn_5_161180 Secondary Identifier:  ? PAC:38965633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_161180 0.5kb upstream 0.5kb upstream 2683   true Lsat_1_v8_lg_5: 299145160-299147842 Lactuca sativa
Lsat_1_v5_gn_5_161180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 299145160-299145659 Lactuca sativa
Lsat_1_v5_gn_5_161180 0.5kb downstream 0.5kb downstream 2683   true Lsat_1_v8_lg_5: 299145660-299148342 Lactuca sativa
Lsat_1_v5_gn_5_161180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 299147843-299148342 Lactuca sativa
Lsat_1_v5_gn_5_161180 1.0kb upstream 1.0kb upstream 3183   true Lsat_1_v8_lg_5: 299144660-299147842 Lactuca sativa
Lsat_1_v5_gn_5_161180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 299144660-299145659 Lactuca sativa
Lsat_1_v5_gn_5_161180 1.0kb downstream 1.0kb downstream 3183   true Lsat_1_v8_lg_5: 299145660-299148842 Lactuca sativa
Lsat_1_v5_gn_5_161180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 299147843-299148842 Lactuca sativa
Lsat_1_v5_gn_5_161180 2.0kb upstream 2.0kb upstream 4183   true Lsat_1_v8_lg_5: 299143660-299147842 Lactuca sativa
Lsat_1_v5_gn_5_161180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 299143660-299145659 Lactuca sativa
Lsat_1_v5_gn_5_161180 2.0kb downstream 2.0kb downstream 4183   true Lsat_1_v8_lg_5: 299145660-299149842 Lactuca sativa
Lsat_1_v5_gn_5_161180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 299147843-299149842 Lactuca sativa
Lsat_1_v5_gn_5_161180 5.0kb upstream 5.0kb upstream 7183   true Lsat_1_v8_lg_5: 299140660-299147842 Lactuca sativa
Lsat_1_v5_gn_5_161180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 299140660-299145659 Lactuca sativa
Lsat_1_v5_gn_5_161180 5.0kb downstream 5.0kb downstream 7183   true Lsat_1_v8_lg_5: 299145660-299152842 Lactuca sativa
Lsat_1_v5_gn_5_161180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 299147843-299152842 Lactuca sativa
Lsat_1_v5_gn_5_161180 10.0kb upstream 10.0kb upstream 12183   true Lsat_1_v8_lg_5: 299135660-299147842 Lactuca sativa
Lsat_1_v5_gn_5_161180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 299135660-299145659 Lactuca sativa
Lsat_1_v5_gn_5_161180 10.0kb downstream 10.0kb downstream 12183   true Lsat_1_v8_lg_5: 299145660-299157842 Lactuca sativa
Lsat_1_v5_gn_5_161180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 299147843-299157842 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472382 5263 Asterids View MSA
123745819 5271 Pentapetalae View MSA
122785700 5272 Eudicot View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain