Gene : Lsat_1_v5_gn_5_164060 L. sativa V8
Defline:  (1 of 1) PTHR12419//PTHR12419:SF25 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4458
Name:  ? Lsat_1_v5_gn_5_164060 Secondary Identifier:  ? PAC:38963656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_164060 0.5kb upstream 0.5kb upstream 5519   true Lsat_1_v8_lg_5: 302665173-302670691 Lactuca sativa
Lsat_1_v5_gn_5_164060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 302670192-302670691 Lactuca sativa
Lsat_1_v5_gn_5_164060 0.5kb downstream 0.5kb downstream 5519   true Lsat_1_v8_lg_5: 302664673-302670191 Lactuca sativa
Lsat_1_v5_gn_5_164060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 302664673-302665172 Lactuca sativa
Lsat_1_v5_gn_5_164060 1.0kb upstream 1.0kb upstream 6019   true Lsat_1_v8_lg_5: 302665173-302671191 Lactuca sativa
Lsat_1_v5_gn_5_164060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 302670192-302671191 Lactuca sativa
Lsat_1_v5_gn_5_164060 1.0kb downstream 1.0kb downstream 6019   true Lsat_1_v8_lg_5: 302664173-302670191 Lactuca sativa
Lsat_1_v5_gn_5_164060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 302664173-302665172 Lactuca sativa
Lsat_1_v5_gn_5_164060 2.0kb upstream 2.0kb upstream 7019   true Lsat_1_v8_lg_5: 302665173-302672191 Lactuca sativa
Lsat_1_v5_gn_5_164060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 302670192-302672191 Lactuca sativa
Lsat_1_v5_gn_5_164060 2.0kb downstream 2.0kb downstream 7019   true Lsat_1_v8_lg_5: 302663173-302670191 Lactuca sativa
Lsat_1_v5_gn_5_164060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 302663173-302665172 Lactuca sativa
Lsat_1_v5_gn_5_164060 5.0kb upstream 5.0kb upstream 10019   true Lsat_1_v8_lg_5: 302665173-302675191 Lactuca sativa
Lsat_1_v5_gn_5_164060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 302670192-302675191 Lactuca sativa
Lsat_1_v5_gn_5_164060 5.0kb downstream 5.0kb downstream 10019   true Lsat_1_v8_lg_5: 302660173-302670191 Lactuca sativa
Lsat_1_v5_gn_5_164060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 302660173-302665172 Lactuca sativa
Lsat_1_v5_gn_5_164060 10.0kb upstream 10.0kb upstream 15019   true Lsat_1_v8_lg_5: 302665173-302680191 Lactuca sativa
Lsat_1_v5_gn_5_164060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 302670192-302680191 Lactuca sativa
Lsat_1_v5_gn_5_164060 10.0kb downstream 10.0kb downstream 15019   true Lsat_1_v8_lg_5: 302655173-302670191 Lactuca sativa
Lsat_1_v5_gn_5_164060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 302655173-302665172 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471387 5263 Asterids View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain