Gene : Lsat_1_v5_gn_5_163841 L. sativa V8
Defline:  (1 of 2) PTHR31344//PTHR31344:SF4 - FAMILY NOT NAMED // NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN Genomic Order:  4464
Name:  ? Lsat_1_v5_gn_5_163841 Secondary Identifier:  ? PAC:38963346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_163841 0.5kb upstream 0.5kb upstream 4714   true Lsat_1_v8_lg_5: 302850654-302855367 Lactuca sativa
Lsat_1_v5_gn_5_163841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 302850654-302851153 Lactuca sativa
Lsat_1_v5_gn_5_163841 0.5kb downstream 0.5kb downstream 4714   true Lsat_1_v8_lg_5: 302851154-302855867 Lactuca sativa
Lsat_1_v5_gn_5_163841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 302855368-302855867 Lactuca sativa
Lsat_1_v5_gn_5_163841 1.0kb upstream 1.0kb upstream 5214   true Lsat_1_v8_lg_5: 302850154-302855367 Lactuca sativa
Lsat_1_v5_gn_5_163841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 302850154-302851153 Lactuca sativa
Lsat_1_v5_gn_5_163841 1.0kb downstream 1.0kb downstream 5214   true Lsat_1_v8_lg_5: 302851154-302856367 Lactuca sativa
Lsat_1_v5_gn_5_163841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 302855368-302856367 Lactuca sativa
Lsat_1_v5_gn_5_163841 2.0kb upstream 2.0kb upstream 6214   true Lsat_1_v8_lg_5: 302849154-302855367 Lactuca sativa
Lsat_1_v5_gn_5_163841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 302849154-302851153 Lactuca sativa
Lsat_1_v5_gn_5_163841 2.0kb downstream 2.0kb downstream 6214   true Lsat_1_v8_lg_5: 302851154-302857367 Lactuca sativa
Lsat_1_v5_gn_5_163841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 302855368-302857367 Lactuca sativa
Lsat_1_v5_gn_5_163841 5.0kb upstream 5.0kb upstream 9214   true Lsat_1_v8_lg_5: 302846154-302855367 Lactuca sativa
Lsat_1_v5_gn_5_163841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 302846154-302851153 Lactuca sativa
Lsat_1_v5_gn_5_163841 5.0kb downstream 5.0kb downstream 9214   true Lsat_1_v8_lg_5: 302851154-302860367 Lactuca sativa
Lsat_1_v5_gn_5_163841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 302855368-302860367 Lactuca sativa
Lsat_1_v5_gn_5_163841 10.0kb upstream 10.0kb upstream 14214   true Lsat_1_v8_lg_5: 302841154-302855367 Lactuca sativa
Lsat_1_v5_gn_5_163841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 302841154-302851153 Lactuca sativa
Lsat_1_v5_gn_5_163841 10.0kb downstream 10.0kb downstream 14214   true Lsat_1_v8_lg_5: 302851154-302865367 Lactuca sativa
Lsat_1_v5_gn_5_163841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 302855368-302865367 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467711 5263 Asterids View MSA
123737150 5271 Pentapetalae View MSA
122789303 5272 Eudicot View MSA
122047501 5273 Angiosperm View MSA
121349213 5274 Embryophyte View MSA
123425563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain