Gene : Lsat_1_v5_gn_5_164160 L. sativa V8
Defline:  (1 of 1) PTHR16052//PTHR16052:SF0//PTHR16052:SF1 - UNCHARACTERIZED // TBCC DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  4455
Name:  ? Lsat_1_v5_gn_5_164160 Secondary Identifier:  ? PAC:38969365
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_164160 0.5kb upstream 0.5kb upstream 3906   true Lsat_1_v8_lg_5: 302417734-302421639 Lactuca sativa
Lsat_1_v5_gn_5_164160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 302421140-302421639 Lactuca sativa
Lsat_1_v5_gn_5_164160 0.5kb downstream 0.5kb downstream 3906   true Lsat_1_v8_lg_5: 302417234-302421139 Lactuca sativa
Lsat_1_v5_gn_5_164160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 302417234-302417733 Lactuca sativa
Lsat_1_v5_gn_5_164160 1.0kb upstream 1.0kb upstream 4406   true Lsat_1_v8_lg_5: 302417734-302422139 Lactuca sativa
Lsat_1_v5_gn_5_164160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 302421140-302422139 Lactuca sativa
Lsat_1_v5_gn_5_164160 1.0kb downstream 1.0kb downstream 4406   true Lsat_1_v8_lg_5: 302416734-302421139 Lactuca sativa
Lsat_1_v5_gn_5_164160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 302416734-302417733 Lactuca sativa
Lsat_1_v5_gn_5_164160 2.0kb upstream 2.0kb upstream 5406   true Lsat_1_v8_lg_5: 302417734-302423139 Lactuca sativa
Lsat_1_v5_gn_5_164160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 302421140-302423139 Lactuca sativa
Lsat_1_v5_gn_5_164160 2.0kb downstream 2.0kb downstream 5406   true Lsat_1_v8_lg_5: 302415734-302421139 Lactuca sativa
Lsat_1_v5_gn_5_164160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 302415734-302417733 Lactuca sativa
Lsat_1_v5_gn_5_164160 5.0kb upstream 5.0kb upstream 8406   true Lsat_1_v8_lg_5: 302417734-302426139 Lactuca sativa
Lsat_1_v5_gn_5_164160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 302421140-302426139 Lactuca sativa
Lsat_1_v5_gn_5_164160 5.0kb downstream 5.0kb downstream 8406   true Lsat_1_v8_lg_5: 302412734-302421139 Lactuca sativa
Lsat_1_v5_gn_5_164160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 302412734-302417733 Lactuca sativa
Lsat_1_v5_gn_5_164160 10.0kb upstream 10.0kb upstream 13406   true Lsat_1_v8_lg_5: 302417734-302431139 Lactuca sativa
Lsat_1_v5_gn_5_164160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 302421140-302431139 Lactuca sativa
Lsat_1_v5_gn_5_164160 10.0kb downstream 10.0kb downstream 13406   true Lsat_1_v8_lg_5: 302407734-302421139 Lactuca sativa
Lsat_1_v5_gn_5_164160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 302407734-302417733 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468586 5263 Asterids View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain