Gene : Lsat_1_v5_gn_5_163380 L. sativa V8
Defline:  (1 of 3) K10256 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD2) Genomic Order:  4486
Name:  ? Lsat_1_v5_gn_5_163380 Secondary Identifier:  ? PAC:38969774
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5995 Lactuca sativa pathologic  
Lsativa PWY-762 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_163380 0.5kb upstream 0.5kb upstream 3830   true Lsat_1_v8_lg_5: 303631915-303635744 Lactuca sativa
Lsat_1_v5_gn_5_163380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 303631915-303632414 Lactuca sativa
Lsat_1_v5_gn_5_163380 0.5kb downstream 0.5kb downstream 3830   true Lsat_1_v8_lg_5: 303632415-303636244 Lactuca sativa
Lsat_1_v5_gn_5_163380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 303635745-303636244 Lactuca sativa
Lsat_1_v5_gn_5_163380 1.0kb upstream 1.0kb upstream 4330   true Lsat_1_v8_lg_5: 303631415-303635744 Lactuca sativa
Lsat_1_v5_gn_5_163380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 303631415-303632414 Lactuca sativa
Lsat_1_v5_gn_5_163380 1.0kb downstream 1.0kb downstream 4330   true Lsat_1_v8_lg_5: 303632415-303636744 Lactuca sativa
Lsat_1_v5_gn_5_163380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 303635745-303636744 Lactuca sativa
Lsat_1_v5_gn_5_163380 2.0kb upstream 2.0kb upstream 5330   true Lsat_1_v8_lg_5: 303630415-303635744 Lactuca sativa
Lsat_1_v5_gn_5_163380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 303630415-303632414 Lactuca sativa
Lsat_1_v5_gn_5_163380 2.0kb downstream 2.0kb downstream 5330   true Lsat_1_v8_lg_5: 303632415-303637744 Lactuca sativa
Lsat_1_v5_gn_5_163380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 303635745-303637744 Lactuca sativa
Lsat_1_v5_gn_5_163380 5.0kb upstream 5.0kb upstream 8330   true Lsat_1_v8_lg_5: 303627415-303635744 Lactuca sativa
Lsat_1_v5_gn_5_163380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 303627415-303632414 Lactuca sativa
Lsat_1_v5_gn_5_163380 5.0kb downstream 5.0kb downstream 8330   true Lsat_1_v8_lg_5: 303632415-303640744 Lactuca sativa
Lsat_1_v5_gn_5_163380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 303635745-303640744 Lactuca sativa
Lsat_1_v5_gn_5_163380 10.0kb upstream 10.0kb upstream 13330   true Lsat_1_v8_lg_5: 303622415-303635744 Lactuca sativa
Lsat_1_v5_gn_5_163380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 303622415-303632414 Lactuca sativa
Lsat_1_v5_gn_5_163380 10.0kb downstream 10.0kb downstream 13330   true Lsat_1_v8_lg_5: 303632415-303645744 Lactuca sativa
Lsat_1_v5_gn_5_163380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 303635745-303645744 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
121476049 5263 Asterids View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain