Gene : Lsat_1_v5_gn_5_163541 L. sativa V8
Defline:  (1 of 7) PTHR22773//PTHR22773:SF86 - NADH DEHYDROGENASE // NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 2 A, CHLOROPLASTIC-RELATED Genomic Order:  4492
Name:  ? Lsat_1_v5_gn_5_163541 Secondary Identifier:  ? PAC:38970870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_163541 0.5kb upstream 0.5kb upstream 969   true Lsat_1_v8_lg_5: 303744532-303745500 Lactuca sativa
Lsat_1_v5_gn_5_163541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 303745001-303745500 Lactuca sativa
Lsat_1_v5_gn_5_163541 0.5kb downstream 0.5kb downstream 969   true Lsat_1_v8_lg_5: 303744032-303745000 Lactuca sativa
Lsat_1_v5_gn_5_163541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 303744032-303744531 Lactuca sativa
Lsat_1_v5_gn_5_163541 1.0kb upstream 1.0kb upstream 1469   true Lsat_1_v8_lg_5: 303744532-303746000 Lactuca sativa
Lsat_1_v5_gn_5_163541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 303745001-303746000 Lactuca sativa
Lsat_1_v5_gn_5_163541 1.0kb downstream 1.0kb downstream 1469   true Lsat_1_v8_lg_5: 303743532-303745000 Lactuca sativa
Lsat_1_v5_gn_5_163541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 303743532-303744531 Lactuca sativa
Lsat_1_v5_gn_5_163541 2.0kb upstream 2.0kb upstream 2469   true Lsat_1_v8_lg_5: 303744532-303747000 Lactuca sativa
Lsat_1_v5_gn_5_163541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 303745001-303747000 Lactuca sativa
Lsat_1_v5_gn_5_163541 2.0kb downstream 2.0kb downstream 2469   true Lsat_1_v8_lg_5: 303742532-303745000 Lactuca sativa
Lsat_1_v5_gn_5_163541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 303742532-303744531 Lactuca sativa
Lsat_1_v5_gn_5_163541 5.0kb upstream 5.0kb upstream 5469   true Lsat_1_v8_lg_5: 303744532-303750000 Lactuca sativa
Lsat_1_v5_gn_5_163541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 303745001-303750000 Lactuca sativa
Lsat_1_v5_gn_5_163541 5.0kb downstream 5.0kb downstream 5469   true Lsat_1_v8_lg_5: 303739532-303745000 Lactuca sativa
Lsat_1_v5_gn_5_163541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 303739532-303744531 Lactuca sativa
Lsat_1_v5_gn_5_163541 10.0kb upstream 10.0kb upstream 10469   true Lsat_1_v8_lg_5: 303744532-303755000 Lactuca sativa
Lsat_1_v5_gn_5_163541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 303745001-303755000 Lactuca sativa
Lsat_1_v5_gn_5_163541 10.0kb downstream 10.0kb downstream 10469   true Lsat_1_v8_lg_5: 303734532-303745000 Lactuca sativa
Lsat_1_v5_gn_5_163541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 303734532-303744531 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480135 5263 Asterids View MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain