Gene : Lsat_1_v5_gn_5_165621 L. sativa V8
Defline:  (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) Genomic Order:  4526
Name:  ? Lsat_1_v5_gn_5_165621 Secondary Identifier:  ? PAC:38966991
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_165621 0.5kb upstream 0.5kb upstream 3394   true Lsat_1_v8_lg_5: 304929379-304932772 Lactuca sativa
Lsat_1_v5_gn_5_165621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 304932273-304932772 Lactuca sativa
Lsat_1_v5_gn_5_165621 0.5kb downstream 0.5kb downstream 3394   true Lsat_1_v8_lg_5: 304928879-304932272 Lactuca sativa
Lsat_1_v5_gn_5_165621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 304928879-304929378 Lactuca sativa
Lsat_1_v5_gn_5_165621 1.0kb upstream 1.0kb upstream 3894   true Lsat_1_v8_lg_5: 304929379-304933272 Lactuca sativa
Lsat_1_v5_gn_5_165621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 304932273-304933272 Lactuca sativa
Lsat_1_v5_gn_5_165621 1.0kb downstream 1.0kb downstream 3894   true Lsat_1_v8_lg_5: 304928379-304932272 Lactuca sativa
Lsat_1_v5_gn_5_165621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 304928379-304929378 Lactuca sativa
Lsat_1_v5_gn_5_165621 2.0kb upstream 2.0kb upstream 4894   true Lsat_1_v8_lg_5: 304929379-304934272 Lactuca sativa
Lsat_1_v5_gn_5_165621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 304932273-304934272 Lactuca sativa
Lsat_1_v5_gn_5_165621 2.0kb downstream 2.0kb downstream 4894   true Lsat_1_v8_lg_5: 304927379-304932272 Lactuca sativa
Lsat_1_v5_gn_5_165621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 304927379-304929378 Lactuca sativa
Lsat_1_v5_gn_5_165621 5.0kb upstream 5.0kb upstream 7894   true Lsat_1_v8_lg_5: 304929379-304937272 Lactuca sativa
Lsat_1_v5_gn_5_165621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 304932273-304937272 Lactuca sativa
Lsat_1_v5_gn_5_165621 5.0kb downstream 5.0kb downstream 7894   true Lsat_1_v8_lg_5: 304924379-304932272 Lactuca sativa
Lsat_1_v5_gn_5_165621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 304924379-304929378 Lactuca sativa
Lsat_1_v5_gn_5_165621 10.0kb upstream 10.0kb upstream 12894   true Lsat_1_v8_lg_5: 304929379-304942272 Lactuca sativa
Lsat_1_v5_gn_5_165621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 304932273-304942272 Lactuca sativa
Lsat_1_v5_gn_5_165621 10.0kb downstream 10.0kb downstream 12894   true Lsat_1_v8_lg_5: 304919379-304932272 Lactuca sativa
Lsat_1_v5_gn_5_165621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 304919379-304929378 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467008 5263 Asterids View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain