Gene : Lsat_1_v5_gn_5_169401 L. sativa V8
Defline:  (1 of 3) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  4654
Name:  ? Lsat_1_v5_gn_5_169401 Secondary Identifier:  ? PAC:38970937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_169401 0.5kb upstream 0.5kb upstream 3672   true Lsat_1_v8_lg_5: 311473421-311477092 Lactuca sativa
Lsat_1_v5_gn_5_169401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 311473421-311473920 Lactuca sativa
Lsat_1_v5_gn_5_169401 0.5kb downstream 0.5kb downstream 3672   true Lsat_1_v8_lg_5: 311473921-311477592 Lactuca sativa
Lsat_1_v5_gn_5_169401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 311477093-311477592 Lactuca sativa
Lsat_1_v5_gn_5_169401 1.0kb upstream 1.0kb upstream 4172   true Lsat_1_v8_lg_5: 311472921-311477092 Lactuca sativa
Lsat_1_v5_gn_5_169401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 311472921-311473920 Lactuca sativa
Lsat_1_v5_gn_5_169401 1.0kb downstream 1.0kb downstream 4172   true Lsat_1_v8_lg_5: 311473921-311478092 Lactuca sativa
Lsat_1_v5_gn_5_169401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 311477093-311478092 Lactuca sativa
Lsat_1_v5_gn_5_169401 2.0kb upstream 2.0kb upstream 5172   true Lsat_1_v8_lg_5: 311471921-311477092 Lactuca sativa
Lsat_1_v5_gn_5_169401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 311471921-311473920 Lactuca sativa
Lsat_1_v5_gn_5_169401 2.0kb downstream 2.0kb downstream 5172   true Lsat_1_v8_lg_5: 311473921-311479092 Lactuca sativa
Lsat_1_v5_gn_5_169401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 311477093-311479092 Lactuca sativa
Lsat_1_v5_gn_5_169401 5.0kb upstream 5.0kb upstream 8172   true Lsat_1_v8_lg_5: 311468921-311477092 Lactuca sativa
Lsat_1_v5_gn_5_169401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 311468921-311473920 Lactuca sativa
Lsat_1_v5_gn_5_169401 5.0kb downstream 5.0kb downstream 8172   true Lsat_1_v8_lg_5: 311473921-311482092 Lactuca sativa
Lsat_1_v5_gn_5_169401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 311477093-311482092 Lactuca sativa
Lsat_1_v5_gn_5_169401 10.0kb upstream 10.0kb upstream 13172   true Lsat_1_v8_lg_5: 311463921-311477092 Lactuca sativa
Lsat_1_v5_gn_5_169401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 311463921-311473920 Lactuca sativa
Lsat_1_v5_gn_5_169401 10.0kb downstream 10.0kb downstream 13172   true Lsat_1_v8_lg_5: 311473921-311487092 Lactuca sativa
Lsat_1_v5_gn_5_169401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 311477093-311487092 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475490 5263 Asterids View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain