Gene : Lsat_1_v5_gn_5_171340 L. sativa V8
Defline:  (1 of 6) K07300 - Ca2+:H+ antiporter (chaA, CAX) Genomic Order:  4729
Name:  ? Lsat_1_v5_gn_5_171340 Secondary Identifier:  ? PAC:38968462
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_171340 0.5kb upstream 0.5kb upstream 3074   true Lsat_1_v8_lg_5: 314501499-314504572 Lactuca sativa
Lsat_1_v5_gn_5_171340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 314504073-314504572 Lactuca sativa
Lsat_1_v5_gn_5_171340 0.5kb downstream 0.5kb downstream 3074   true Lsat_1_v8_lg_5: 314500999-314504072 Lactuca sativa
Lsat_1_v5_gn_5_171340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 314500999-314501498 Lactuca sativa
Lsat_1_v5_gn_5_171340 1.0kb upstream 1.0kb upstream 3574   true Lsat_1_v8_lg_5: 314501499-314505072 Lactuca sativa
Lsat_1_v5_gn_5_171340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 314504073-314505072 Lactuca sativa
Lsat_1_v5_gn_5_171340 1.0kb downstream 1.0kb downstream 3574   true Lsat_1_v8_lg_5: 314500499-314504072 Lactuca sativa
Lsat_1_v5_gn_5_171340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 314500499-314501498 Lactuca sativa
Lsat_1_v5_gn_5_171340 2.0kb upstream 2.0kb upstream 4574   true Lsat_1_v8_lg_5: 314501499-314506072 Lactuca sativa
Lsat_1_v5_gn_5_171340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 314504073-314506072 Lactuca sativa
Lsat_1_v5_gn_5_171340 2.0kb downstream 2.0kb downstream 4574   true Lsat_1_v8_lg_5: 314499499-314504072 Lactuca sativa
Lsat_1_v5_gn_5_171340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 314499499-314501498 Lactuca sativa
Lsat_1_v5_gn_5_171340 5.0kb upstream 5.0kb upstream 7574   true Lsat_1_v8_lg_5: 314501499-314509072 Lactuca sativa
Lsat_1_v5_gn_5_171340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 314504073-314509072 Lactuca sativa
Lsat_1_v5_gn_5_171340 5.0kb downstream 5.0kb downstream 7574   true Lsat_1_v8_lg_5: 314496499-314504072 Lactuca sativa
Lsat_1_v5_gn_5_171340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 314496499-314501498 Lactuca sativa
Lsat_1_v5_gn_5_171340 10.0kb upstream 10.0kb upstream 12574   true Lsat_1_v8_lg_5: 314501499-314514072 Lactuca sativa
Lsat_1_v5_gn_5_171340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 314504073-314514072 Lactuca sativa
Lsat_1_v5_gn_5_171340 10.0kb downstream 10.0kb downstream 12574   true Lsat_1_v8_lg_5: 314491499-314504072 Lactuca sativa
Lsat_1_v5_gn_5_171340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 314491499-314501498 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480099 5263 Asterids View MSA
123745086 5271 Pentapetalae View MSA
122771361 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain