Gene : Lsat_1_v5_gn_5_17121 L. sativa V8
Defline:  (1 of 12) PF03181 - BURP domain (BURP) Genomic Order:  447
Name:  ? Lsat_1_v5_gn_5_17121 Secondary Identifier:  ? PAC:38968406
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_17121 0.5kb upstream 0.5kb upstream 2725   true Lsat_1_v8_lg_5: 35375966-35378690 Lactuca sativa
Lsat_1_v5_gn_5_17121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 35375966-35376465 Lactuca sativa
Lsat_1_v5_gn_5_17121 0.5kb downstream 0.5kb downstream 2725   true Lsat_1_v8_lg_5: 35376466-35379190 Lactuca sativa
Lsat_1_v5_gn_5_17121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 35378691-35379190 Lactuca sativa
Lsat_1_v5_gn_5_17121 1.0kb upstream 1.0kb upstream 3225   true Lsat_1_v8_lg_5: 35375466-35378690 Lactuca sativa
Lsat_1_v5_gn_5_17121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 35375466-35376465 Lactuca sativa
Lsat_1_v5_gn_5_17121 1.0kb downstream 1.0kb downstream 3225   true Lsat_1_v8_lg_5: 35376466-35379690 Lactuca sativa
Lsat_1_v5_gn_5_17121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 35378691-35379690 Lactuca sativa
Lsat_1_v5_gn_5_17121 2.0kb upstream 2.0kb upstream 4225   true Lsat_1_v8_lg_5: 35374466-35378690 Lactuca sativa
Lsat_1_v5_gn_5_17121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 35374466-35376465 Lactuca sativa
Lsat_1_v5_gn_5_17121 2.0kb downstream 2.0kb downstream 4225   true Lsat_1_v8_lg_5: 35376466-35380690 Lactuca sativa
Lsat_1_v5_gn_5_17121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 35378691-35380690 Lactuca sativa
Lsat_1_v5_gn_5_17121 5.0kb upstream 5.0kb upstream 7225   true Lsat_1_v8_lg_5: 35371466-35378690 Lactuca sativa
Lsat_1_v5_gn_5_17121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 35371466-35376465 Lactuca sativa
Lsat_1_v5_gn_5_17121 5.0kb downstream 5.0kb downstream 7225   true Lsat_1_v8_lg_5: 35376466-35383690 Lactuca sativa
Lsat_1_v5_gn_5_17121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 35378691-35383690 Lactuca sativa
Lsat_1_v5_gn_5_17121 10.0kb upstream 10.0kb upstream 12225   true Lsat_1_v8_lg_5: 35366466-35378690 Lactuca sativa
Lsat_1_v5_gn_5_17121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 35366466-35376465 Lactuca sativa
Lsat_1_v5_gn_5_17121 10.0kb downstream 10.0kb downstream 12225   true Lsat_1_v8_lg_5: 35376466-35388690 Lactuca sativa
Lsat_1_v5_gn_5_17121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 35378691-35388690 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473368 5263 Asterids View MSA
123746875 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain