Gene : Lsat_1_v5_gn_5_17020 L. sativa V8
Defline:  (1 of 2) PTHR22939//PTHR22939:SF85 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // SUBFAMILY NOT NAMED Genomic Order:  452
Name:  ? Lsat_1_v5_gn_5_17020 Secondary Identifier:  ? PAC:38963532
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_17020 0.5kb upstream 0.5kb upstream 3231   true Lsat_1_v8_lg_5: 35458451-35461681 Lactuca sativa
Lsat_1_v5_gn_5_17020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 35461182-35461681 Lactuca sativa
Lsat_1_v5_gn_5_17020 0.5kb downstream 0.5kb downstream 3231   true Lsat_1_v8_lg_5: 35457951-35461181 Lactuca sativa
Lsat_1_v5_gn_5_17020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 35457951-35458450 Lactuca sativa
Lsat_1_v5_gn_5_17020 1.0kb upstream 1.0kb upstream 3731   true Lsat_1_v8_lg_5: 35458451-35462181 Lactuca sativa
Lsat_1_v5_gn_5_17020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 35461182-35462181 Lactuca sativa
Lsat_1_v5_gn_5_17020 1.0kb downstream 1.0kb downstream 3731   true Lsat_1_v8_lg_5: 35457451-35461181 Lactuca sativa
Lsat_1_v5_gn_5_17020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 35457451-35458450 Lactuca sativa
Lsat_1_v5_gn_5_17020 2.0kb upstream 2.0kb upstream 4731   true Lsat_1_v8_lg_5: 35458451-35463181 Lactuca sativa
Lsat_1_v5_gn_5_17020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 35461182-35463181 Lactuca sativa
Lsat_1_v5_gn_5_17020 2.0kb downstream 2.0kb downstream 4731   true Lsat_1_v8_lg_5: 35456451-35461181 Lactuca sativa
Lsat_1_v5_gn_5_17020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 35456451-35458450 Lactuca sativa
Lsat_1_v5_gn_5_17020 5.0kb upstream 5.0kb upstream 7731   true Lsat_1_v8_lg_5: 35458451-35466181 Lactuca sativa
Lsat_1_v5_gn_5_17020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 35461182-35466181 Lactuca sativa
Lsat_1_v5_gn_5_17020 5.0kb downstream 5.0kb downstream 7731   true Lsat_1_v8_lg_5: 35453451-35461181 Lactuca sativa
Lsat_1_v5_gn_5_17020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 35453451-35458450 Lactuca sativa
Lsat_1_v5_gn_5_17020 10.0kb upstream 10.0kb upstream 12731   true Lsat_1_v8_lg_5: 35458451-35471181 Lactuca sativa
Lsat_1_v5_gn_5_17020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 35461182-35471181 Lactuca sativa
Lsat_1_v5_gn_5_17020 10.0kb downstream 10.0kb downstream 12731   true Lsat_1_v8_lg_5: 35448451-35461181 Lactuca sativa
Lsat_1_v5_gn_5_17020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 35448451-35458450 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467243 5263 Asterids View MSA
123741119 5271 Pentapetalae View MSA
122794115 5272 Eudicot View MSA
122046723 5273 Angiosperm View MSA
121346662 5274 Embryophyte View MSA
123426440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain