Gene : Lsat_1_v5_gn_5_170120 L. sativa V8
Defline:  (1 of 8) PTHR21596//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // F16A14.2-RELATED Genomic Order:  4694
Name:  ? Lsat_1_v5_gn_5_170120 Secondary Identifier:  ? PAC:38964575
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_170120 0.5kb upstream 0.5kb upstream 2139   true Lsat_1_v8_lg_5: 313239403-313241541 Lactuca sativa
Lsat_1_v5_gn_5_170120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 313241042-313241541 Lactuca sativa
Lsat_1_v5_gn_5_170120 0.5kb downstream 0.5kb downstream 2139   true Lsat_1_v8_lg_5: 313238903-313241041 Lactuca sativa
Lsat_1_v5_gn_5_170120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 313238903-313239402 Lactuca sativa
Lsat_1_v5_gn_5_170120 1.0kb upstream 1.0kb upstream 2639   true Lsat_1_v8_lg_5: 313239403-313242041 Lactuca sativa
Lsat_1_v5_gn_5_170120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 313241042-313242041 Lactuca sativa
Lsat_1_v5_gn_5_170120 1.0kb downstream 1.0kb downstream 2639   true Lsat_1_v8_lg_5: 313238403-313241041 Lactuca sativa
Lsat_1_v5_gn_5_170120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 313238403-313239402 Lactuca sativa
Lsat_1_v5_gn_5_170120 2.0kb upstream 2.0kb upstream 3639   true Lsat_1_v8_lg_5: 313239403-313243041 Lactuca sativa
Lsat_1_v5_gn_5_170120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 313241042-313243041 Lactuca sativa
Lsat_1_v5_gn_5_170120 2.0kb downstream 2.0kb downstream 3639   true Lsat_1_v8_lg_5: 313237403-313241041 Lactuca sativa
Lsat_1_v5_gn_5_170120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 313237403-313239402 Lactuca sativa
Lsat_1_v5_gn_5_170120 5.0kb upstream 5.0kb upstream 6639   true Lsat_1_v8_lg_5: 313239403-313246041 Lactuca sativa
Lsat_1_v5_gn_5_170120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 313241042-313246041 Lactuca sativa
Lsat_1_v5_gn_5_170120 5.0kb downstream 5.0kb downstream 6639   true Lsat_1_v8_lg_5: 313234403-313241041 Lactuca sativa
Lsat_1_v5_gn_5_170120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 313234403-313239402 Lactuca sativa
Lsat_1_v5_gn_5_170120 10.0kb upstream 10.0kb upstream 11639   true Lsat_1_v8_lg_5: 313239403-313251041 Lactuca sativa
Lsat_1_v5_gn_5_170120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 313241042-313251041 Lactuca sativa
Lsat_1_v5_gn_5_170120 10.0kb downstream 10.0kb downstream 11639   true Lsat_1_v8_lg_5: 313229403-313241041 Lactuca sativa
Lsat_1_v5_gn_5_170120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 313229403-313239402 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121450115 5263 Asterids View MSA
123753047 5271 Pentapetalae View MSA
122797032 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain