Gene : Lsat_1_v5_gn_5_170441 L. sativa V8
Defline:  (1 of 1) PTHR21596//PTHR21596:SF23//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED // F16A14.2-RELATED Genomic Order:  4683
Name:  ? Lsat_1_v5_gn_5_170441 Secondary Identifier:  ? PAC:38966673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_170441 0.5kb upstream 0.5kb upstream 7404   true Lsat_1_v8_lg_5: 312860315-312867718 Lactuca sativa
Lsat_1_v5_gn_5_170441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 312860315-312860814 Lactuca sativa
Lsat_1_v5_gn_5_170441 0.5kb downstream 0.5kb downstream 7404   true Lsat_1_v8_lg_5: 312860815-312868218 Lactuca sativa
Lsat_1_v5_gn_5_170441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 312867719-312868218 Lactuca sativa
Lsat_1_v5_gn_5_170441 1.0kb upstream 1.0kb upstream 7904   true Lsat_1_v8_lg_5: 312859815-312867718 Lactuca sativa
Lsat_1_v5_gn_5_170441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 312859815-312860814 Lactuca sativa
Lsat_1_v5_gn_5_170441 1.0kb downstream 1.0kb downstream 7904   true Lsat_1_v8_lg_5: 312860815-312868718 Lactuca sativa
Lsat_1_v5_gn_5_170441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 312867719-312868718 Lactuca sativa
Lsat_1_v5_gn_5_170441 2.0kb upstream 2.0kb upstream 8904   true Lsat_1_v8_lg_5: 312858815-312867718 Lactuca sativa
Lsat_1_v5_gn_5_170441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 312858815-312860814 Lactuca sativa
Lsat_1_v5_gn_5_170441 2.0kb downstream 2.0kb downstream 8904   true Lsat_1_v8_lg_5: 312860815-312869718 Lactuca sativa
Lsat_1_v5_gn_5_170441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 312867719-312869718 Lactuca sativa
Lsat_1_v5_gn_5_170441 5.0kb upstream 5.0kb upstream 11904   true Lsat_1_v8_lg_5: 312855815-312867718 Lactuca sativa
Lsat_1_v5_gn_5_170441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 312855815-312860814 Lactuca sativa
Lsat_1_v5_gn_5_170441 5.0kb downstream 5.0kb downstream 11904   true Lsat_1_v8_lg_5: 312860815-312872718 Lactuca sativa
Lsat_1_v5_gn_5_170441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 312867719-312872718 Lactuca sativa
Lsat_1_v5_gn_5_170441 10.0kb upstream 10.0kb upstream 16904   true Lsat_1_v8_lg_5: 312850815-312867718 Lactuca sativa
Lsat_1_v5_gn_5_170441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 312850815-312860814 Lactuca sativa
Lsat_1_v5_gn_5_170441 10.0kb downstream 10.0kb downstream 16904   true Lsat_1_v8_lg_5: 312860815-312877718 Lactuca sativa
Lsat_1_v5_gn_5_170441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 312867719-312877718 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121450115 5263 Asterids View MSA
123753047 5271 Pentapetalae View MSA
122797032 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain