Gene : Lsat_1_v5_gn_5_170401 L. sativa V8
Defline:  (1 of 8) PTHR21596//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // F16A14.2-RELATED Genomic Order:  4685
Name:  ? Lsat_1_v5_gn_5_170401 Secondary Identifier:  ? PAC:38966926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_170401 0.5kb upstream 0.5kb upstream 2398   true Lsat_1_v8_lg_5: 312886352-312888749 Lactuca sativa
Lsat_1_v5_gn_5_170401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 312886352-312886851 Lactuca sativa
Lsat_1_v5_gn_5_170401 0.5kb downstream 0.5kb downstream 2398   true Lsat_1_v8_lg_5: 312886852-312889249 Lactuca sativa
Lsat_1_v5_gn_5_170401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 312888750-312889249 Lactuca sativa
Lsat_1_v5_gn_5_170401 1.0kb upstream 1.0kb upstream 2898   true Lsat_1_v8_lg_5: 312885852-312888749 Lactuca sativa
Lsat_1_v5_gn_5_170401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 312885852-312886851 Lactuca sativa
Lsat_1_v5_gn_5_170401 1.0kb downstream 1.0kb downstream 2898   true Lsat_1_v8_lg_5: 312886852-312889749 Lactuca sativa
Lsat_1_v5_gn_5_170401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 312888750-312889749 Lactuca sativa
Lsat_1_v5_gn_5_170401 2.0kb upstream 2.0kb upstream 3898   true Lsat_1_v8_lg_5: 312884852-312888749 Lactuca sativa
Lsat_1_v5_gn_5_170401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 312884852-312886851 Lactuca sativa
Lsat_1_v5_gn_5_170401 2.0kb downstream 2.0kb downstream 3898   true Lsat_1_v8_lg_5: 312886852-312890749 Lactuca sativa
Lsat_1_v5_gn_5_170401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 312888750-312890749 Lactuca sativa
Lsat_1_v5_gn_5_170401 5.0kb upstream 5.0kb upstream 6898   true Lsat_1_v8_lg_5: 312881852-312888749 Lactuca sativa
Lsat_1_v5_gn_5_170401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 312881852-312886851 Lactuca sativa
Lsat_1_v5_gn_5_170401 5.0kb downstream 5.0kb downstream 6898   true Lsat_1_v8_lg_5: 312886852-312893749 Lactuca sativa
Lsat_1_v5_gn_5_170401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 312888750-312893749 Lactuca sativa
Lsat_1_v5_gn_5_170401 10.0kb upstream 10.0kb upstream 11898   true Lsat_1_v8_lg_5: 312876852-312888749 Lactuca sativa
Lsat_1_v5_gn_5_170401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 312876852-312886851 Lactuca sativa
Lsat_1_v5_gn_5_170401 10.0kb downstream 10.0kb downstream 11898   true Lsat_1_v8_lg_5: 312886852-312898749 Lactuca sativa
Lsat_1_v5_gn_5_170401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 312888750-312898749 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121450115 5263 Asterids View MSA
123753047 5271 Pentapetalae View MSA
122797032 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain