Gene : Lsat_1_v5_gn_5_170380 L. sativa V8
Defline:  (1 of 1) PTHR21596//PTHR21596:SF16//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED // F16A14.2-RELATED Genomic Order:  4686
Name:  ? Lsat_1_v5_gn_5_170380 Secondary Identifier:  ? PAC:38970680
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_170380 0.5kb upstream 0.5kb upstream 4182   true Lsat_1_v8_lg_5: 312889328-312893509 Lactuca sativa
Lsat_1_v5_gn_5_170380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 312893010-312893509 Lactuca sativa
Lsat_1_v5_gn_5_170380 0.5kb downstream 0.5kb downstream 4182   true Lsat_1_v8_lg_5: 312888828-312893009 Lactuca sativa
Lsat_1_v5_gn_5_170380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 312888828-312889327 Lactuca sativa
Lsat_1_v5_gn_5_170380 1.0kb upstream 1.0kb upstream 4682   true Lsat_1_v8_lg_5: 312889328-312894009 Lactuca sativa
Lsat_1_v5_gn_5_170380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 312893010-312894009 Lactuca sativa
Lsat_1_v5_gn_5_170380 1.0kb downstream 1.0kb downstream 4682   true Lsat_1_v8_lg_5: 312888328-312893009 Lactuca sativa
Lsat_1_v5_gn_5_170380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 312888328-312889327 Lactuca sativa
Lsat_1_v5_gn_5_170380 2.0kb upstream 2.0kb upstream 5682   true Lsat_1_v8_lg_5: 312889328-312895009 Lactuca sativa
Lsat_1_v5_gn_5_170380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 312893010-312895009 Lactuca sativa
Lsat_1_v5_gn_5_170380 2.0kb downstream 2.0kb downstream 5682   true Lsat_1_v8_lg_5: 312887328-312893009 Lactuca sativa
Lsat_1_v5_gn_5_170380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 312887328-312889327 Lactuca sativa
Lsat_1_v5_gn_5_170380 5.0kb upstream 5.0kb upstream 8682   true Lsat_1_v8_lg_5: 312889328-312898009 Lactuca sativa
Lsat_1_v5_gn_5_170380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 312893010-312898009 Lactuca sativa
Lsat_1_v5_gn_5_170380 5.0kb downstream 5.0kb downstream 8682   true Lsat_1_v8_lg_5: 312884328-312893009 Lactuca sativa
Lsat_1_v5_gn_5_170380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 312884328-312889327 Lactuca sativa
Lsat_1_v5_gn_5_170380 10.0kb upstream 10.0kb upstream 13682   true Lsat_1_v8_lg_5: 312889328-312903009 Lactuca sativa
Lsat_1_v5_gn_5_170380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 312893010-312903009 Lactuca sativa
Lsat_1_v5_gn_5_170380 10.0kb downstream 10.0kb downstream 13682   true Lsat_1_v8_lg_5: 312879328-312893009 Lactuca sativa
Lsat_1_v5_gn_5_170380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 312879328-312889327 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121450115 5263 Asterids View MSA
123753047 5271 Pentapetalae View MSA
122797032 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain