Gene : Lsat_1_v5_gn_5_39360 L. sativa V8
Defline:  (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC Genomic Order:  1053
Name:  ? Lsat_1_v5_gn_5_39360 Secondary Identifier:  ? PAC:38964239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_39360 0.5kb upstream 0.5kb upstream 2568   true Lsat_1_v8_lg_5: 83954839-83957406 Lactuca sativa
Lsat_1_v5_gn_5_39360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 83954839-83955338 Lactuca sativa
Lsat_1_v5_gn_5_39360 0.5kb downstream 0.5kb downstream 2568   true Lsat_1_v8_lg_5: 83955339-83957906 Lactuca sativa
Lsat_1_v5_gn_5_39360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 83957407-83957906 Lactuca sativa
Lsat_1_v5_gn_5_39360 1.0kb upstream 1.0kb upstream 3068   true Lsat_1_v8_lg_5: 83954339-83957406 Lactuca sativa
Lsat_1_v5_gn_5_39360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 83954339-83955338 Lactuca sativa
Lsat_1_v5_gn_5_39360 1.0kb downstream 1.0kb downstream 3068   true Lsat_1_v8_lg_5: 83955339-83958406 Lactuca sativa
Lsat_1_v5_gn_5_39360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 83957407-83958406 Lactuca sativa
Lsat_1_v5_gn_5_39360 2.0kb upstream 2.0kb upstream 4068   true Lsat_1_v8_lg_5: 83953339-83957406 Lactuca sativa
Lsat_1_v5_gn_5_39360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 83953339-83955338 Lactuca sativa
Lsat_1_v5_gn_5_39360 2.0kb downstream 2.0kb downstream 4068   true Lsat_1_v8_lg_5: 83955339-83959406 Lactuca sativa
Lsat_1_v5_gn_5_39360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 83957407-83959406 Lactuca sativa
Lsat_1_v5_gn_5_39360 5.0kb upstream 5.0kb upstream 7068   true Lsat_1_v8_lg_5: 83950339-83957406 Lactuca sativa
Lsat_1_v5_gn_5_39360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 83950339-83955338 Lactuca sativa
Lsat_1_v5_gn_5_39360 5.0kb downstream 5.0kb downstream 7068   true Lsat_1_v8_lg_5: 83955339-83962406 Lactuca sativa
Lsat_1_v5_gn_5_39360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 83957407-83962406 Lactuca sativa
Lsat_1_v5_gn_5_39360 10.0kb upstream 10.0kb upstream 12068   true Lsat_1_v8_lg_5: 83945339-83957406 Lactuca sativa
Lsat_1_v5_gn_5_39360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 83945339-83955338 Lactuca sativa
Lsat_1_v5_gn_5_39360 10.0kb downstream 10.0kb downstream 12068   true Lsat_1_v8_lg_5: 83955339-83967406 Lactuca sativa
Lsat_1_v5_gn_5_39360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 83957407-83967406 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473331 5263 Asterids View MSA
123740000 5271 Pentapetalae View MSA
122792600 5272 Eudicot View MSA
122046362 5273 Angiosperm View MSA
121346119 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain